RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ccdc150Q8CDI7 1110 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 DpydQ8CHR6 1025 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Polr2dQ9D7M8 142 aaKnown RBP12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Clic4Q9QYB1 253 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tbc1d4Q8BYJ6 1307 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Top1Q04750 767 aaKnown RBP12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ppp1r7Q3UM45 361 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gbp4Q61107 620 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cnga2Q62398 664 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Skor1Q8BX46 964 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Tubb6Q922F4 447 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ndufab1Q9CR21 156 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Speer4bQ9D9F7 267 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 ChmQ9QXG2 665 aa12.16□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Nckap5lQ6GQX2 1323 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 E4f1Q8CCE9 783 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Kif24Q6NWW5 1356 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gm21663A0A0G2JE01 267 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 5031410I06RikE9Q4E0 267 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gm5862K7N5V5 267 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Gm10220K7N660 267 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Ankrd13cQ3UX43 541 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Irf9Q61179 399 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Kcnj14Q8JZN3 434 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 GptQ8QZR5 496 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Nup133Q8R0G9 1155 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Cnot6lQ8VEG6 555 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 Col14a1Q80X19 1797 aa12.15□□□□□ -0.46
Rnf40-201ENSMUST00000033088 LtkP08923 888 aa12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Lins1Q3U1D0 764 aa12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Drc1Q3USS3 753 aa12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Zbtb40Q6PCS8 1258 aa12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Dnaaf2Q8BPI1 814 aa12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Golph3lQ8R088 285 aaKnown RBP12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 PpanQ91YU8 470 aaKnown RBP12.15□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cdk12Q14AX6 1484 aaKnown RBP12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Phlpp1Q8CHE4 1687 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Kif3cO35066 796 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 CebpaP53566 359 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ctdspl2Q8BG15 465 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Eif2ak3Q9Z2B5 1114 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Thsd7aQ69ZU6 1645 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Frmpd2A0A140LI67 1392 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Znf541Q0GGX2 1363 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Anxa1P10107 346 aaKnown RBP12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 NapbP28663 298 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 MmeQ61391 750 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Krt39Q6IFX4 482 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cplx4Q80WM3 160 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cep89Q9CZX2 791 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Armc9Q9D2I5 817 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Klf15Q9EPW2 415 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Kank3Q9Z1P7 791 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 PaskQ8CEE6 1383 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Stx8O88983 236 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Csrnp1P59054 583 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 HelqQ2VPA6 1069 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Rab3il1Q8VDV3 383 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 KynuQ9CXF0 464 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Spc24Q9D083 201 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Col4a3bpQ9EQG9 624 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 C3P01027 1663 aa12.14□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Uhrf1bp1lA2RSJ4 1457 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ugt1a6bK9J7B2 531 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Grm8P47743 908 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 SfswapQ3USH5 945 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ugt1a6Q64435 531 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ugt1a7cQ6ZQM8 531 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ppp2r2cQ8BG02 447 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Tubgcp2Q921G8 905 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm5624F6ZZG8 207 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ube2oQ6ZPJ3 1288 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 IqcgQ80W32 419 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Synpo2Q91YE8 1087 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Unc13bQ9Z1N9 1602 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 A0A1W2P6Q8 802 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm9048A0A1W2P7H4 802 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 A0A1W2P7S8 802 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 A0A1W2P7Z8 802 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm9046A0A1W2P855 802 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Specc1lQ2KN98 1118 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ift88Q61371 824 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cdc5lQ6A068 802 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Luc7l2Q7TNC4 392 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Spag7Q7TNE3 227 aaKnown RBP12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ublcp1Q8BGR9 318 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Nek9Q8K1R7 984 aa12.13□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Gm21680A0A0G2JGR8 267 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 MycnP03966 462 aaKnown RBP12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Nf2P46662 596 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Adam1aQ60813 791 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ccdc186Q8C9S4 917 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Aldh1l2Q8K009 923 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 CerkQ8K4Q7 531 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 TxlnbQ8VBT1 685 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ankrd1Q9CR42 319 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Cbx8Q9QXV1 362 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Ncapd2Q8K2Z4 1392 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 NalcnQ8BXR5 1738 aa12.12□□□□□ -0.47
Rnf40-201ENSMUST00000033088 Sgsm2Q80U12 1005 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms