RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Ncaph2Q8BSP2 607 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ccdc158Q8CDI6 1109 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Atad2Q8CDM1 1040 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Lrrfip2Q91WK0 415 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Erc1Q99MI1 1120 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 DonsonQ9QXP4 560 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Atp1a4Q9WV27 1032 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Snapc4Q8BP86 1333 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Cfap99A0A140LIX9 648 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Rbbp8nlA2ABX0 614 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Zbtb45Q52KG4 520 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Tbx2Q60707 711 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Nlrp9bQ66X22 1003 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Zbtb40Q6PCS8 1258 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ccdc82Q6PG04 518 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Cd209bQ8CJ91 325 aa13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Edc3Q8K2D3 508 aaKnown RBP13.9□□□□□ -0.18
Ufd1-201ENSMUST00000005394 A0A1L1SQF0 893 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Ccdc191J3QQ27 883 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Cep63Q3UPP8 700 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Gm28047Q3US59 414 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Fhod1Q6P9Q4 1197 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Fchsd1Q6PFY1 688 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Ppp2r2cQ8BG02 447 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Zfp202Q8C879 641 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Brms1Q99N20 246 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 MicalclQ9D5U9 680 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Arhgap33Q80YF9 1305 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Sptlc2P97363 560 aaKnown RBP13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 TrhQ62361 256 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tmem87bQ8BKU8 555 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tmx4Q8C0L0 335 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Mb21d2Q8C525 428 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Bicdl2Q8CHW5 507 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tmc2Q8R4P4 888 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Stk38Q91VJ4 465 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Chaf1aQ9QWF0 911 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Myo1cQ9WTI7 1063 aa13.89□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Simc1E9Q6E9 1354 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Mdh1P14152 334 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Usp5P56399 858 aaKnown RBP13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 TxlnaQ6PAM1 554 aaKnown RBP13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tubb2aQ7TMM9 445 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Nxf7Q80SZ6 620 aaKnown RBP13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Ppp1r37Q8BKR5 712 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Ppm1mQ8BU27 406 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Fsd2Q8BZ52 692 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Nat10Q8K224 1024 aaKnown RBP13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tubb2bQ9CWF2 445 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Speer4bQ9D9F7 267 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Cdc45Q9Z1X9 566 aa13.88□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Ets1P27577 440 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Pim2Q62070 370 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 DbnlQ62418 436 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Btbd11Q6GQW0 1109 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 ThemisQ8BGW0 636 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Afg3l2Q8JZQ2 802 aaKnown RBP13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 GckrQ91X44 587 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Sycp2lA0A0M3U1B0 842 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Pramel3A2AHA7 463 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Gm7903A2AWL1 463 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 AV320801A2AWL3 467 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Gm15023L7MUB4 467 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Slc1a4O35874 532 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Fkbp4P30416 458 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Bag1Q60739 355 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 4930572O03RikQ8C5Y0 211 aa13.87□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Prl7a2O54831 253 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Usp13Q5BKP2 858 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 IqcgQ80W32 419 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 4930504O13RikQ8C5Z9 145 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Clic4Q9QYB1 253 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Taf7Q9R1C0 341 aa13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Usp42B2RQC2 1324 aaKnown RBP13.86□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Q8BT18 775 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Pms1Q8K119 917 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Hps3Q91VB4 1002 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Terf2ipQ91VL8 393 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Prr29B1ARI9 187 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Pola2P33611 600 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Pfkfb1P70266 471 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tubb5P99024 444 aaKnown RBP13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Nlrp1aQ2LKU9 1182 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 AcrbpQ3V140 540 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Klra4Q60651 263 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Fsd1Q7TPM6 496 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 InsrrQ9WTL4 1300 aa13.85□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Samd1D3YXK1 519 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Cct2P80314 535 aaKnown RBP13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Cdr2P97817 455 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Asnsd1Q8BFS9 627 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Nek9Q8K1R7 984 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Arl8aQ8VEH3 186 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 RabggtaQ9JHK4 567 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Magi2Q9WVQ1 1275 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Sos2Q02384 1333 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Carmil3Q3UFQ8 1375 aa13.84□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Gng11P61953 73 aa13.83□□□□□ -0.19
Ufd1-201ENSMUST00000005394 SympkQ80X82 1284 aa13.83□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Tmco3Q8BH01 678 aa13.83□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms