RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RAB26Q9ULW5 256 aa10.69□□□□□ -0.7
LINC00339-211ENST00000641009 C13orf42A0A1B0GVH6 325 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 METTL21EPA6NDL7 271 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 APELAP0DMC3 54 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 CBX3Q13185 183 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 RTL8BQ17RB0 113 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 TMEM177Q53S58 311 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 SBSPONQ8IVN8 264 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 OR4C12Q96R67 309 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 ANKRD34BA5PLL1 514 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 TRIM64CA6NLI5 447 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 LINC00473A8K010 186 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 H3BUA1 57 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 J3QRK9 145 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 GALP22466 123 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
LINC00339-211ENST00000641009 GABARAPL2P60520 117 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 TAGLNQ01995 201 aaKnown RBP10.68□□□□□ -0.7
LINC00339-211ENST00000641009 IDO2Q6ZQW0 420 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 Q6ZS49 121 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-211ENST00000641009 DDB2Q92466 427 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 RSRP1Q9BUV0 290 aa10.68□□□□□ -0.7
LINC00339-211ENST00000641009 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-211ENST00000641009 CRYZL1O95825 349 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 RRASP10301 218 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 PSMB9P28065 219 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 SRSF7Q16629 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC00339-211ENST00000641009 CDNFQ49AH0 187 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 UBE2UQ5VVX9 321 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 PHB2Q99623 299 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 ST6GALNAC5Q9BVH7 336 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 ELOVL1Q9BW60 279 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 TXNL4BQ9NX01 149 aaKnown RBP10.67□□□□□ -0.7
LINC00339-211ENST00000641009 COA4Q9NYJ1 87 aa10.67□□□□□ -0.7
LINC00339-211ENST00000641009 A0A0G2JLM5 398 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 ZP3P21754 424 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 DTYMKP23919 212 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 VMA21Q3ZAQ7 101 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 SPARTQ8N0X7 666 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 TINAGL1Q9GZM7 467 aaPredicted RBP10.66□□□□□ -0.7
LINC00339-211ENST00000641009 STUB1Q9UNE7 303 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 CSMD3Q7Z407 3707 aa10.66□□□□□ -0.7
LINC00339-211ENST00000641009 TMEM235A6NFC5 223 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 MSGN1A6NI15 193 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 NOTOA8MTQ0 251 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 MRPS14O60783 128 aaKnown RBP10.65□□□□□ -0.7
LINC00339-211ENST00000641009 RBMXL2O75526 392 aaKnown RBP10.65□□□□□ -0.7
LINC00339-211ENST00000641009 IGLV1-51P01701 117 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 TRBV12-3P01733 135 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 NFYAP23511 347 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-211ENST00000641009 FGF9P31371 208 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-211ENST00000641009 UBE2KP61086 200 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 KLF5Q13887 457 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-211ENST00000641009 TNXAQ16473 311 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 PRSS8Q16651 343 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 HACD4Q5VWC8 232 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 ANKRD13BQ86YJ7 626 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 TEX45Q8NA69 505 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 NUDCD2Q8WVJ2 157 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 TMEM68Q96MH6 324 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 RCHY1Q96PM5 261 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 DAPK2Q9UIK4 370 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 ADAM30Q9UKF2 790 aa10.65□□□□□ -0.7
LINC00339-211ENST00000641009 FCGR3BO75015 233 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ATP6V1G2O95670 118 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 DYRK1AQ13627 763 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 OR2B11Q5JQS5 317 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ZNF645Q8N7E2 425 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ADAD2Q8NCV1 583 aaKnown RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 OSR1Q8TAX0 266 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 SRSF12Q8WXF0 261 aaKnown RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ACOT12Q8WYK0 555 aa10.64□□□□□ -0.71
LINC00339-211ENST00000641009 ZNF430Q9H8G1 570 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 PEF1Q9UBV8 284 aaKnown RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 DYNC2H1Q8NCM8 4307 aaKnown RBP10.64□□□□□ -0.71
LINC00339-211ENST00000641009 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 BRI3O95415 125 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-211ENST00000641009 IGKV1-13P0DP09 117 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 AADACP22760 399 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 RPL30P62888 115 aaKnown RBP10.63□□□□□ -0.71
LINC00339-211ENST00000641009 ZNF343Q6P1L6 599 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 Q8N1Y9 231 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 OR9G4Q8NGQ1 327 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 DCUN1D5Q9BTE7 237 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
LINC00339-211ENST00000641009 MPPED1O15442 326 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 SSX5O60225 188 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 TUSC2O75896 110 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms