RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-242ENST00000640577 TNCP24821 2201 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
SPIN3-242ENST00000640577 NDUFB7P17568 137 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 PLA2G5P39877 138 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 RPS16P62249 146 aaKnown RBP12.65□□□□□ -0.38
SPIN3-242ENST00000640577 ADORA2A-AS1P86434 159 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 SSX9Q7RTT3 188 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 ZNF439Q8NDP4 499 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
SPIN3-242ENST00000640577 RAB29O14966 203 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 GPR37O15354 613 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 PPT1P50897 306 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 HFEQ30201 348 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 TCTEX1D1Q8N7M0 179 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 DDB2Q92466 427 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 NGBQ9NPG2 151 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 CACNA1AO00555 2505 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 GNG10P50151 68 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 RAB5CP51148 216 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 TAS2R30P59541 319 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 OR2B8PP59922 312 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 TMEM14EPQ6UXP3 125 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
SPIN3-242ENST00000640577 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
SPIN3-242ENST00000640577 SLC25A10Q9UBX3 287 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-242ENST00000640577 STRAPQ9Y3F4 350 aaKnown RBP12.64□□□□□ -0.39
SPIN3-242ENST00000640577 TRAV3A0A0B4J244 114 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 TNFRSF13BO14836 293 aaPredicted RBP12.63□□□□□ -0.39
SPIN3-242ENST00000640577 CASP6P55212 293 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 OR8G2PQ6IF36 304 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 SPSB3Q6PJ21 355 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 CORO2AQ92828 525 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 EGLN1Q9GZT9 426 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 TMEM106BQ9NUM4 274 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 ASH1LQ9NR48 2969 aaKnown RBP12.63□□□□□ -0.39
SPIN3-242ENST00000640577 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 H7C2Y5 167 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 TSPAN9O75954 239 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 LY6DQ14210 128 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 GUK1Q16774 197 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
SPIN3-242ENST00000640577 RBMXL2O75526 392 aaKnown RBP12.62□□□□□ -0.39
SPIN3-242ENST00000640577 DFFBO76075 338 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 CCL3L1P16619 93 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 CHRNB4P30926 498 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 LYG1Q8N1E2 194 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-242ENST00000640577 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
SPIN3-242ENST00000640577 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 ZNF729A6NN14 1252 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-242ENST00000640577 PMS2P5A8MQ11 134 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 HPRT1P00492 218 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 CD3EP07766 207 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 HNF4GQ14541 408 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 SP5Q6BEB4 398 aaPredicted RBP12.62□□□□□ -0.39
SPIN3-242ENST00000640577 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 DTD1Q8TEA8 209 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
SPIN3-242ENST00000640577 UMAD1C9J7I0 102 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 PPIHO43447 177 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 APOBEC3AP31941 199 aaPredicted RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 AKR1C3P42330 323 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 RPL31P62899 125 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 CISD1Q9NZ45 108 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 RPUSD1Q9UJJ7 312 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 NKX6-3A6NJ46 265 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 LYNX1G3V0Z9 82 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 IFNA5P01569 189 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 LYNX1P0DP58 116 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 RAB7AP51149 207 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 MRPS11P82912 194 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 SLC38A11Q08AI6 406 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 ZCCHC14Q8WYQ9 949 aaKnown RBP12.61□□□□□ -0.39
SPIN3-242ENST00000640577 S1PR3Q99500 378 aa12.61□□□□□ -0.39
SPIN3-242ENST00000640577 RARRES2Q99969 163 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms