RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 HBE1P02100 147 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 GATAD1Q8WUU5 269 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 TAF15Q92804 592 aaKnown RBP eCLIP11.67□□□□□ -0.54
GFAP-237ENST00000640552 HIST1H2BAQ96A08 127 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 CTRB1P17538 263 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
GFAP-237ENST00000640552 TIMM23BQ5SRD1 257 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 CTRB2Q6GPI1 263 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
GFAP-237ENST00000640552 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
GFAP-237ENST00000640552 GZMHP20718 246 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 SCNM1Q9BWG6 230 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
GFAP-237ENST00000640552 TRGV10A0A0A0MS01 117 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 MGST3O14880 152 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 OR9G9P0C7N8 305 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 APELAP0DMC3 54 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 KITLGP21583 273 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 C1orf162Q8NEQ5 155 aaPredicted RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 OR10G4Q8NGN3 311 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 OR10G9Q8NGN4 311 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 OR10G7Q8NGN6 311 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 ASH1LQ9NR48 2969 aaKnown RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 TRAV38-1A0A0B4J264 116 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 ZNF737O75373 536 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 GLRXP35754 106 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 CD200P41217 278 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 ZNF134P52741 427 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 COMMD1Q8N668 190 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 A0A1W2PPV4 95 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 COLCA2A8K830 154 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 CD40P25942 277 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
GFAP-237ENST00000640552 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
GFAP-237ENST00000640552 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 C16orf97H3BN30 126 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 OR4A8P0C604 315 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 ICAM4Q14773 271 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 IGFL2Q6UWQ7 119 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 Q6ZS92 163 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 RHOVQ96L33 236 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 C12orf57Q99622 126 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 SMIM7Q9BQ49 75 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 FAM90A27PA6NNH2 459 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 CYB5BO43169 146 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 ACTL6BO94805 426 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 CGAP01215 116 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 SLC25A6P12236 298 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 COL8A2P25067 703 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 DLX1P56177 255 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 MRPS11P82912 194 aaKnown RBP11.65□□□□□ -0.54
GFAP-237ENST00000640552 RHEBQ15382 184 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 MORN2Q502X0 79 aa11.65□□□□□ -0.54
GFAP-237ENST00000640552 ARHGAP32A7KAX9 2087 aa11.65□□□□□ -0.55
GFAP-237ENST00000640552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.64□□□□□ -0.55
GFAP-237ENST00000640552 SRP19P09132 144 aaKnown RBP11.64□□□□□ -0.55
GFAP-237ENST00000640552 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 ASCL5Q7RTU5 278 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 NEUROG1Q92886 237 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 HIPK2Q9H2X6 1198 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 S100A9P06702 114 aaKnown RBP11.64□□□□□ -0.55
GFAP-237ENST00000640552 NDUFA6P56556 154 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 BSPH1Q075Z2 132 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 FABP9Q0Z7S8 132 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 SLC16A13Q7RTY0 426 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 FAM122AQ96E09 287 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 SNX22Q96L94 193 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
GFAP-237ENST00000640552 GCM1Q9NP62 436 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 PIGBOS1A0A0B4J2F0 54 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 CCL3L1P16619 93 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 RAB5AP20339 215 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 DOLPP1Q86YN1 238 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 CLDND2Q8NHS1 167 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
GFAP-237ENST00000640552 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
GFAP-237ENST00000640552 A8MXE2 369 aa11.63□□□□□ -0.55
GFAP-237ENST00000640552 ENSAO43768 121 aaKnown RBP11.63□□□□□ -0.55
GFAP-237ENST00000640552 MMP23AO75900 390 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms