RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DERL1Q9BUN8 251 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
SCARB2-221ENST00000640341 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-221ENST00000640341 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 PIGBOS1A0A0B4J2F0 54 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 MARCH11A6NNE9 402 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 C11orf94C9JXX5 98 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF146Q15072 292 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 HES3Q5TGS1 186 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 VWA1Q6PCB0 445 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 PRDM13Q9H4Q3 707 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 GP6Q9HCN6 339 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
SCARB2-221ENST00000640341 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 A0A1W2PPV4 95 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 IFNL4K9M1U5 179 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 KBTBD11O94819 623 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 FER1L6-AS2Q96M78 137 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 P2RX4Q99571 388 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 DDA1Q9BW61 102 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 GYPAP02724 150 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 HIST1H1BP16401 226 aaKnown RBP12.21□□□□□ -0.45
SCARB2-221ENST00000640341 GPX4P36969 197 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-221ENST00000640341 BRWD1-AS2P59051 145 aa12.21□□□□□ -0.45
SCARB2-221ENST00000640341 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-221ENST00000640341 ATP5G3P48201 142 aa12.21□□□□□ -0.46
SCARB2-221ENST00000640341 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-221ENST00000640341 PRAMEF5Q5TYX0 476 aa12.21□□□□□ -0.46
SCARB2-221ENST00000640341 CYP2G1PQ6ZSU1 146 aa12.21□□□□□ -0.46
SCARB2-221ENST00000640341 OR2Z1Q8NG97 314 aa12.21□□□□□ -0.46
SCARB2-221ENST00000640341 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.46
SCARB2-221ENST00000640341 INTS1Q8N201 2190 aaKnown RBP12.21□□□□□ -0.46
SCARB2-221ENST00000640341 PLCE1Q9P212 2302 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-221ENST00000640341 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 CDC34P49427 236 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-221ENST00000640341 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 GUCD1Q96NT3 240 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 C21orf140B9A014 251 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 NDUFB4O95168 129 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 RND2P52198 227 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-221ENST00000640341 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 SPRY4Q9C004 299 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 POLEQ07864 2286 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 PCNX1Q96RV3 2341 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-221ENST00000640341 A0A087X0M5 115 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 A0A1B0GX30 115 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 NPIPB11E5RHQ5 1161 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 TSTD3H0UI37 97 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 M0R1X1 148 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 GPR12P47775 334 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 LRRC29Q8WV35 223 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 R3HDM4Q96D70 268 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 PITPNC1Q9UKF7 332 aa12.2□□□□□ -0.46
SCARB2-221ENST00000640341 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 A0A1B0GUS0 222 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 GCH1P30793 250 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 PKDREJQ9NTG1 2253 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 TRBV24-1A0A075B6N3 115 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 A0A1B0GV90 55 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 NKX2-8O15522 239 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 OR9G9P0C7N8 305 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 PMS2P11Q13670 270 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 MRPL41Q8IXM3 137 aaKnown RBP12.19□□□□□ -0.46
SCARB2-221ENST00000640341 MDS2Q8NDY4 140 aa12.19□□□□□ -0.46
SCARB2-221ENST00000640341 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 ZNRF1Q8ND25 227 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-221ENST00000640341 WDR82Q6UXN9 313 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-221ENST00000640341 ZNF320A2RRD8 509 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 SPINT2O43291 252 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 AMBPP02760 352 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
SCARB2-221ENST00000640341 RNF224P0DH78 156 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 FOXF2Q12947 444 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 GMPPAQ96IJ6 420 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-221ENST00000640341 CTDSP1Q9GZU7 261 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 SRD5A3Q9H8P0 318 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
SCARB2-221ENST00000640341 ADGRG4Q8IZF6 3080 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 CD1BP29016 333 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 THBS3P49746 956 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 TMEM178AQ8NBL3 297 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms