RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
CCDC7-216ENST00000640058 IGHV3-73A0A0B4J1V6 119 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 MUC21A0A0G2JKD1 596 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 MUC21A0A140T8X8 626 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 GNG14A0A1W2PPG7 69 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 LINC00862A6NCI5 91 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 LY6LH3BQJ8 138 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 SOD1P00441 154 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 HBZP02008 142 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 ATP5G1P05496 136 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CRYBA1P05813 215 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 RPS17P08708 135 aaKnown RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 OR4E1P0C645 316 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 ESDP10768 282 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CPMP14384 443 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 SLCO1A2P46721 670 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 GNG10P50151 68 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CDK9P50750 372 aaKnown RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 DEFB103AP81534 67 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 TMEM267Q0VDI3 215 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 SMCO1Q147U7 214 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 GUK1Q16774 197 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CCDC58Q4VC31 144 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 OGFRL1Q5TC84 451 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 RASL11AQ6T310 242 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 FAM19A5Q7Z5A7 132 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 TAC4Q86UU9 113 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 FUNDC1Q8IVP5 155 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 OR11H1Q8NG94 326 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 OR5B17Q8NGF7 314 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 OR10D3Q8NH80 312 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 FAM172AQ8WUF8 416 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 RNF133Q8WVZ7 376 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 TMBIM1Q969X1 311 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CMTM5Q96DZ9 223 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 DNAJC30Q96LL9 226 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 NKX6-2Q9C056 277 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 EIF5A2Q9GZV4 153 aaKnown RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 CXCL16Q9H2A7 254 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 PARVAQ9NVD7 372 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 FGFR1OP2Q9NVK5 253 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 TXNL4BQ9NX01 149 aaKnown RBP1.37□□□□□ -2.19
CCDC7-216ENST00000640058 TAS2R7Q9NYW3 318 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 ARL2BPQ9Y2Y0 163 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 MINOS1-NBL1R4GNA1 71 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 PLCH2O75038 1416 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 COL4A2P08572 1712 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 SCRIBQ14160 1630 aa1.37□□□□□ -2.19
CCDC7-216ENST00000640058 DICER1Q9UPY3 1922 aaKnown RBP1.36□□□□□ -2.19
CCDC7-216ENST00000640058 MTUS2Q5JR59 1369 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 NUMA1Q14980 2115 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 A0A0J9YX75 114 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 COPEO14579 308 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 AZIN1O14977 448 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 ATP8B1O43520 1251 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SSNA1O43805 119 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 CIAO1O76071 339 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 CTXN2P0C2S0 81 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 LINC00614P0C842 121 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 CCL3P10147 92 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 NPPCP23582 126 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 G0S2P27469 103 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 MAGEA12P43365 314 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 OMPP47874 163 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 AP2S1P53680 142 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-216ENST00000640058 HERVK_113P63121 156 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SPCS2Q15005 226 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 NDUFA5Q16718 116 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SLC36A2Q495M3 483 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 TMED4Q7Z7H5 227 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SLC51BQ86UW2 128 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 TRAPPC5Q8IUR0 188 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 Q8N402 240 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 RNASE11Q8TAA1 199 aaKnown RBP1.36□□□□□ -2.19
CCDC7-216ENST00000640058 FNDC9Q8TBE3 224 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 C16orf78Q8WTQ4 265 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 GBF1Q92538 1859 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 AP3S1Q92572 193 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SLC35B4Q969S0 331 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 TLCD1Q96CP7 247 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 PACRGQ96M98 296 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-216ENST00000640058 TSC22D3Q99576 134 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 MS4A6AQ9H2W1 248 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SLC2A9Q9NRM0 540 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SPANXB1Q9NS25 103 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-216ENST00000640058 DNAJC12Q9UKB3 198 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 SLC22A13Q9Y226 551 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 TIMM22Q9Y584 194 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 NCKAP5O14513 1909 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 ZNF532Q9HCE3 1301 aa1.36□□□□□ -2.19
CCDC7-216ENST00000640058 DCAF1Q9Y4B6 1507 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 STRCP1A6NGW2 1772 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 IGHV3-15A0A0B4J1V0 119 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 A0A1B0GV72 72 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 LOC105371267A0A1B0GV96 52 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 TINCRA0A1B0GVN0 87 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 FUOMA2VDF0 154 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 EFCAB10A6NFE3 127 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 M0QZ92 97 aa1.35□□□□□ -2.19
CCDC7-216ENST00000640058 KPNA3O00505 521 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms