RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CRYGBP07316 175 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SSBP2P81877 361 aaPredicted RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 MRGPRG-AS1Q2M3A8 158 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 KHDC1LQ5JSQ8 128 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 KCTD9Q7L273 389 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 TMEM17Q86X19 198 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 R3HDM4Q96D70 268 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 ADTRPQ96IZ2 230 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 TSNAXQ99598 290 aaKnown RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 ZNF2Q9BSG1 426 aaPredicted RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SLC5A7Q9GZV3 580 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 TSSC4Q9Y5U2 329 aaPredicted RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 MEGF8Q7Z7M0 2845 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 CCDC160A6NGH7 325 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SULT1C2O00338 296 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SHOXO15266 292 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 FCGR3BO75015 233 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SLC22A5O76082 557 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 CA2P00918 260 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 RTL8BQ17RB0 113 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 ZNF818PQ6ZRF7 136 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 MFSD4AQ8N468 514 aa17.07■□□□□ 0.32
SCN1B-206ENST00000638536 FAM103A1Q9BTL3 118 aaKnown RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 C6orf62Q9GZU0 229 aaPredicted RBP17.07■□□□□ 0.32
SCN1B-206ENST00000638536 SPDEFO95238 335 aa17.06■□□□□ 0.32
SCN1B-206ENST00000638536 PPIFP30405 207 aaKnown RBP17.06■□□□□ 0.32
SCN1B-206ENST00000638536 TAS2R46P59540 309 aa17.06■□□□□ 0.32
SCN1B-206ENST00000638536 SLC35B1P78383 322 aa17.06■□□□□ 0.32
SCN1B-206ENST00000638536 TAGLNQ01995 201 aaKnown RBP17.06■□□□□ 0.32
SCN1B-206ENST00000638536 IDO2Q6ZQW0 420 aa17.06■□□□□ 0.32
SCN1B-206ENST00000638536 ARPC1BO15143 372 aaKnown RBP17.05■□□□□ 0.32
SCN1B-206ENST00000638536 OPN1MWP04001 364 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 RPLP1P05386 114 aaKnown RBP17.05■□□□□ 0.32
SCN1B-206ENST00000638536 OPN1MW2P0DN77 364 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 OPN1MW3P0DN78 364 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 GNRHRP30968 328 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 LGALS7P47929 136 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 DGCR2P98153 550 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 TCTEX1D2Q8WW35 142 aa17.05■□□□□ 0.32
SCN1B-206ENST00000638536 NXF2Q9GZY0 626 aaKnown RBP17.05■□□□□ 0.32
SCN1B-206ENST00000638536 M0QYG6 137 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 RRASP10301 218 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 VDAC1P21796 283 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 RCVRNP35243 200 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 C19orf54Q5BKX5 351 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 TEX38Q6PEX7 206 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 PPP1R27Q86WC6 154 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 MOB3AQ96BX8 217 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 DIRAS2Q96HU8 199 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 HSD17B10Q99714 261 aaKnown RBP17.04■□□□□ 0.32
SCN1B-206ENST00000638536 DCUN1D5Q9BTE7 237 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 FXYD6Q9H0Q3 95 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 ZNF580Q9UK33 172 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 A3GALT2U3KPV4 340 aa17.04■□□□□ 0.32
SCN1B-206ENST00000638536 IGHG4P01861 327 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 RPL23AP62750 156 aaKnown RBP17.03■□□□□ 0.32
SCN1B-206ENST00000638536 ECSCRQ19T08 205 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 ZNF562Q6V9R5 426 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 VKORC1L1Q8N0U8 176 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 KLK15Q9H2R5 256 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 MTFP1Q9UDX5 166 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 RSL24D1Q9UHA3 163 aaKnown RBP17.03■□□□□ 0.32
SCN1B-206ENST00000638536 NUBP2Q9Y5Y2 271 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 TRAV41A0A0B4J266 112 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 SOX15O60248 233 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 RAMP3O60896 148 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 HERV-K104P61576 105 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 CBX3Q13185 183 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 ZNF66Q6ZN08 573 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 MCFD2Q8NI22 146 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 TINAGL1Q9GZM7 467 aaPredicted RBP17.03■□□□□ 0.32
SCN1B-206ENST00000638536 PRELID3BQ9Y3B1 194 aa17.03■□□□□ 0.32
SCN1B-206ENST00000638536 DNAH3Q8TD57 4116 aa17.02■□□□□ 0.32
SCN1B-206ENST00000638536 PSMB8P28062 276 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 MSMO1Q15800 293 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 COMMD1Q8N668 190 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 RNF152Q8N8N0 203 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 MINDY2Q8NBR6 621 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 OR6F1Q8NGZ6 308 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 OSR1Q8TAX0 266 aaPredicted RBP17.02■□□□□ 0.31
SCN1B-206ENST00000638536 GON7Q9BXV9 100 aa17.02■□□□□ 0.31
SCN1B-206ENST00000638536 TPPPO94811 219 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 CD3DP04234 171 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
SCN1B-206ENST00000638536 TNFSF8P32971 234 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 CRIP2P52943 208 aaPredicted RBP17.01■□□□□ 0.31
SCN1B-206ENST00000638536 GNB1P62873 340 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 FOXE3Q13461 319 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 FXYD3Q14802 87 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 LFNGQ8NES3 379 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 OR4F17Q8NGA8 305 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 OR4D10Q8NGI6 311 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 ABHD5Q8WTS1 349 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 OR4F4Q96R69 305 aa17.01■□□□□ 0.31
SCN1B-206ENST00000638536 IGLV1-40P01703 118 aa17■□□□□ 0.31
SCN1B-206ENST00000638536 UBE2KP61086 200 aa17■□□□□ 0.31
SCN1B-206ENST00000638536 IL18Q14116 193 aa17■□□□□ 0.31
SCN1B-206ENST00000638536 KIAA0141Q14154 515 aaPredicted RBP17■□□□□ 0.31
SCN1B-206ENST00000638536 C8orf86Q6ZUL3 223 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms