RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SRSF10O75494 262 aaKnown RBP12.22□□□□□ -0.45
SCARB2-208ENST00000638372 IGHV3-48P01763 117 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 COL8A1P27658 744 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 UCP3P55916 312 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 B4DEV8 164 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-208ENST00000638372 CLDN18P56856 261 aa12.22□□□□□ -0.45
SCARB2-208ENST00000638372 C12orf77C9JDV5 145 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 NTN3O00634 580 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-208ENST00000638372 NDUFB4O95168 129 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 HOXA6P31267 233 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.45
SCARB2-208ENST00000638372 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-208ENST00000638372 ZNF596Q8TC21 504 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 DCTN5Q9BTE1 182 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 PDE6DO43924 150 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 NEURL1O76050 574 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 SFXN3Q9BWM7 321 aa12.21□□□□□ -0.45
SCARB2-208ENST00000638372 GLRXP35754 106 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 SLC35B1P78383 322 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 Q8WTZ3 238 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 VAMP8Q9BV40 100 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 IGLV3-32A0A0A0MS00 114 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 ZNF716A6NP11 495 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 IGHV1-2P23083 117 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 MEOX2P50222 304 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 IQCJQ1A5X6 159 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-208ENST00000638372 SGMS2Q8NHU3 365 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 RAB24Q969Q5 203 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 LYZL4Q96KX0 146 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 RARRES2Q99969 163 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 RTBDNQ9BSG5 229 aaPredicted RBP12.21□□□□□ -0.46
SCARB2-208ENST00000638372 GP6Q9HCN6 339 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 SIRT7Q9NRC8 400 aa12.21□□□□□ -0.46
SCARB2-208ENST00000638372 FANCMQ8IYD8 2048 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 J3KRW8 73 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 ARF6P62330 175 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 ZNF273Q14593 569 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 WBP1Q96G27 269 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 LINC00869P0C866 280 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 ACSF3Q4G176 576 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-208ENST00000638372 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 ABHD17AQ96GS6 310 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 C9orf106Q8NAJ2 232 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 PERPQ96FX8 193 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 WDYHV1Q96HA8 205 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 PARD6AQ9NPB6 346 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 IER3P46695 156 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
SCARB2-208ENST00000638372 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 RND3P61587 244 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
SCARB2-208ENST00000638372 RPL39P5Q59GN2 51 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 ABLIM2Q6H8Q1 611 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 SLC25A28Q96A46 364 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 IDI2-AS1Q9NZ38 188 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 TCF19Q9Y242 345 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 J3QW42 95 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 ZIC4Q8N9L1 334 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 RNF115Q9Y4L5 304 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 ERVFRD-1P60508 538 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 DHRS11Q6UWP2 260 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
SCARB2-208ENST00000638372 TMSB15BA0A087X1C1 80 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 ATXN7O15265 892 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-208ENST00000638372 P01737 135 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 MC5RP33032 325 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 RPL29P47914 159 aaKnown RBP12.18□□□□□ -0.46
SCARB2-208ENST00000638372 RND2P52198 227 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 FAM131CQ96AQ9 280 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-208ENST00000638372 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 SMDT1Q9H4I9 107 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 CD59P13987 128 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 NRN1LQ496H8 165 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms