RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 MKRN2OSH3BPM6 223 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 ORMDL3Q8N138 153 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
UBE3A-227ENST00000638011 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 CITED1Q99966 193 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 HEXA-AS1Q9H8Q6 139 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 CNTFRP26992 372 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 ZFP64Q9NPA5 681 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-227ENST00000638011 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 MMP17Q9ULZ9 603 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 GCSAMLQ5JQS6 135 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 DLL1O00548 723 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 KLK2P20151 261 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-227ENST00000638011 IL36RNQ9UBH0 155 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 GDF9O60383 454 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 OR11G2Q8NGC1 345 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 TRGV5A0A0B4J1U4 118 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 PSG2P11465 335 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 UCP3P55916 312 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
UBE3A-227ENST00000638011 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 RPL8P62917 257 aaKnown RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 ANKRD34AQ69YU3 496 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 A0A1W2PRS3 328 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 RND3P61587 244 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 INSL4Q14641 139 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 SMIM8Q96KF7 97 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 IFNL4K9M1U5 179 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 NKX2-8O15522 239 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 ISG15P05161 165 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 APCDD1LQ8NCL9 501 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 OR2H1Q9GZK4 316 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 A0A1W2PQD3 144 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.313e-7■□□□□ 10
UBE3A-227ENST00000638011 NEU1Q99519 415 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 PPIHO43447 177 aaKnown RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 HSD52Q0P140 79 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 OLIG3Q7RTU3 272 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 BIVMQ86UB2 503 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
UBE3A-227ENST00000638011 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 TRBV7-9A0A0J9YWB2 115 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 LOC105371267A0A1B0GV96 52 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 TMEM170BQ5T4T1 132 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 ELSPBP1Q96BH3 223 aa13.14□□□□□ -0.31
UBE3A-227ENST00000638011 TRAV9-2A0A087WT02 112 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 ESDP10768 282 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 DLK2Q6UY11 383 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 MARS2Q96GW9 593 aaKnown RBP13.13□□□□□ -0.31
UBE3A-227ENST00000638011 RRHO14718 337 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 TNFSF15O95150 251 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 RBM11P57052 281 aaKnown RBP13.13□□□□□ -0.31
UBE3A-227ENST00000638011 ATXN8Q156A1 80 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 RFESDQ8TAC1 157 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 IGHV3-15A0A0B4J1V0 119 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 CLDN14O95500 239 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 PPBPP02775 128 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 SMPXQ9UHP9 88 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 K7ESM1 405 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 F11P03951 625 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 PLPPR1Q8TBJ4 325 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 TMEM242Q9NWH2 141 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 J3QT63 122 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
UBE3A-227ENST00000638011 LCTP09848 1927 aa13.13□□□□□ -0.31
UBE3A-227ENST00000638011 NYNRINQ9P2P1 1898 aaKnown RBP13.12□□□□□ -0.31
UBE3A-227ENST00000638011 SOCS1O15524 211 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 C14orf144Q96I85 54 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 CYP2G1PQ6ZSU1 146 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 DDB2Q92466 427 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 SLC6A13Q9NSD5 602 aa13.12□□□□□ -0.31
UBE3A-227ENST00000638011 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
UBE3A-227ENST00000638011 PAX2Q02962 417 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms