RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 UBR3Q6ZT12 1888 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 WFDC3Q8IUB2 231 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 SSC4DQ8WTU2 575 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 IL36RNQ9UBH0 155 aa16.87■□□□□ 0.29
CACNA1A-257ENST00000638009 ZFP64Q9NPA5 681 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 TMEM202A6NGA9 273 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 NDUFA2O43678 99 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 NKX2-6A6NCS4 301 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 VAX1Q5SQQ9 334 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 RHOVQ96L33 236 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 PF4V1P10720 104 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 MGAT2Q10469 447 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 ZNF600Q6ZNG1 722 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 PRSS12P56730 875 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 ATXN8Q156A1 80 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 C1orf185Q5T7R7 199 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 OR4X2Q8NGF9 303 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 CTAG1AP78358 180 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 TET2Q6N021 2002 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 TMPRSS3P57727 454 aa16.86■□□□□ 0.29
CACNA1A-257ENST00000638009 SRFP11831 508 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 RPS27P42677 84 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 HIST1H2BAQ96A08 127 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 SLC6A13Q9NSD5 602 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 PQLC2LA1A4F0 135 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 PSG2P11465 335 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 LCN2P80188 198 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 Q5PR19 223 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 MARS2Q96GW9 593 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 NTMQ9P121 344 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 GUCA2BQ16661 112 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 INO80CQ6PI98 192 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 KLK15Q9H2R5 256 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 DENND4CQ5VZ89 1909 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 PLAUP00749 431 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 ZNF146Q15072 292 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 ORAOV1Q8WV07 137 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 DNAJC30Q96LL9 226 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 EDA2RQ9HAV5 297 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 TMEM179BQ7Z7N9 219 aa16.85■□□□□ 0.29
CACNA1A-257ENST00000638009 FAM90A27PA6NNH2 459 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 FAM74A4Q5TZK3 123 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 GVQW1Q8N7I0 195 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 PSMB11A5LHX3 300 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 PAX1P15863 534 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 ST6GAL2Q96JF0 529 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 DPH3P1Q9H4G8 78 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 ADRA2AP08913 450 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 NR2C2APQ86WQ0 139 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 IGKV3D-11A0A0A0MRZ8 115 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 IGKV3-11P04433 115 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 CD1AP06126 327 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 RPL27AP46776 148 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 XAF1Q6GPH4 301 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 SFXN3Q9BWM7 321 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 NKX2-2O95096 273 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 FGF22Q9HCT0 170 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 KCNE1BA0A087WTH5 132 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 TIMM23BQ5SRD1 257 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 BIVMQ86UB2 503 aa16.84■□□□□ 0.29
CACNA1A-257ENST00000638009 CCSMST1Q4G0I0 132 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 KCNS1Q96KK3 526 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 TNFRSF19Q9NS68 423 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 SCGB3A1Q96QR1 104 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 A0A1B0GUT8 65 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 ZNF793Q6ZN11 406 aa16.83■□□□□ 0.29
CACNA1A-257ENST00000638009 A0A0U1RQV5 110 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 MUC1P15941 1255 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 RBM11P57052 281 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 SRSF12Q8WXF0 261 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 A8MWV9 139 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 CXCL3P19876 107 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 MBD1Q9UIS9 605 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 IGKV3D-15A0A087WSY6 115 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 IGKV3-15P01624 115 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 FRRS1LQ9P0K9 344 aa16.83■□□□□ 0.28
CACNA1A-257ENST00000638009 PGPEP1LA6NFU8 196 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 ORMDL3Q8N138 153 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 TMEM171Q8WVE6 324 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 CTLA4P16410 223 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 SDF2L1Q9HCN8 221 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 J3QT63 122 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 UNQ9370/PRO34162Q6UXP9 181 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 FMC1Q96HJ9 113 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 RGP1Q92546 391 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 FOXB2Q5VYV0 432 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 CCL27Q9Y4X3 112 aa16.82■□□□□ 0.28
CACNA1A-257ENST00000638009 RPL36A-HNRNPH2H7BZ11 118 aa16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 HOXD4P09016 255 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 TMEM106BQ9NUM4 274 aa16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 SYNGR3O43761 229 aa16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
CACNA1A-257ENST00000638009 C8orf88P0DMB2 117 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms