RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 RRASP10301 218 aa15.43■□□□□ 0.06
CLN6-222ENST00000637667 SRSF7Q16629 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLN6-222ENST00000637667 H1FOOQ8IZA3 346 aaPredicted RBP15.43■□□□□ 0.06
CLN6-222ENST00000637667 TMEM68Q96MH6 324 aa15.43■□□□□ 0.06
CLN6-222ENST00000637667 CENPOQ9BU64 300 aa15.43■□□□□ 0.06
CLN6-222ENST00000637667 RANGRFQ9HD47 186 aaPredicted RBP15.43■□□□□ 0.06
CLN6-222ENST00000637667 IGKV1D-8A0A087WSZ0 117 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 A0A0G2JLM5 398 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 MRPS14O60783 128 aaKnown RBP15.42■□□□□ 0.06
CLN6-222ENST00000637667 ZP3P21754 424 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 GABARAPL2P60520 117 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 ADTRPQ96IZ2 230 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 ELOVL1Q9BW60 279 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 ATG5Q9H1Y0 275 aa15.42■□□□□ 0.06
CLN6-222ENST00000637667 SMIM30A4D0T7 59 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 DTYMKP23919 212 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 DUTP33316 252 aaKnown RBP15.41■□□□□ 0.06
CLN6-222ENST00000637667 ARL6IP1Q15041 203 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 SBSPONQ8IVN8 264 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 DDB2Q92466 427 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 ELF5Q9UKW6 265 aaPredicted RBP15.41■□□□□ 0.06
CLN6-222ENST00000637667 STUB1Q9UNE7 303 aa15.41■□□□□ 0.06
CLN6-222ENST00000637667 HUWE1Q7Z6Z7 4374 aaKnown RBP15.4■□□□□ 0.06
CLN6-222ENST00000637667 ANKRD34BA5PLL1 514 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 TRIM64CA6NLI5 447 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 BRI3O95415 125 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 CRYZL1O95825 349 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 MRGPRG-AS1Q2M3A8 158 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 VMA21Q3ZAQ7 101 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 CDNFQ49AH0 187 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 UBE2UQ5VVX9 321 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 OVCH2Q7RTZ1 564 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 HAPLN4Q86UW8 402 aa15.4■□□□□ 0.06
CLN6-222ENST00000637667 TINAGL1Q9GZM7 467 aaPredicted RBP15.4■□□□□ 0.06
CLN6-222ENST00000637667 LINC00473A8K010 186 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 NOTOA8MTQ0 251 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 FRMD6-AS1P0C7T7 363 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 PSMB9P28065 219 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 FGF9P31371 208 aaPredicted RBP15.39■□□□□ 0.05
CLN6-222ENST00000637667 UBE2KP61086 200 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 PRSS8Q16651 343 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 TEX45Q8NA69 505 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 RSRP1Q9BUV0 290 aa15.39■□□□□ 0.05
CLN6-222ENST00000637667 IGLV1-51P01701 117 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 AADACP22760 399 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 DEFA5Q01523 94 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 KLF5Q13887 457 aaPredicted RBP15.38■□□□□ 0.05
CLN6-222ENST00000637667 HACD4Q5VWC8 232 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 ANKRD13BQ86YJ7 626 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 SPARTQ8N0X7 666 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 PHB2Q99623 299 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 ST6GALNAC5Q9BVH7 336 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 TXNL4BQ9NX01 149 aaKnown RBP15.38■□□□□ 0.05
CLN6-222ENST00000637667 COA4Q9NYJ1 87 aa15.38■□□□□ 0.05
CLN6-222ENST00000637667 MSGN1A6NI15 193 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 J3QRK9 145 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 APELAP0DMC3 54 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 DYRK1AQ13627 763 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 TNXAQ16473 311 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 IDO2Q6ZQW0 420 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 ADAD2Q8NCV1 583 aaKnown RBP15.37■□□□□ 0.05
CLN6-222ENST00000637667 OSR1Q8TAX0 266 aaPredicted RBP15.37■□□□□ 0.05
CLN6-222ENST00000637667 FCGR1BQ92637 280 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 USMG5Q96IX5 58 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 RCHY1Q96PM5 261 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 OR2W1Q9Y3N9 320 aa15.37■□□□□ 0.05
CLN6-222ENST00000637667 RYR3Q15413 4870 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 C3orf84H3BNL1 204 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 ZNF343Q6P1L6 599 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 TPRA1Q86W33 373 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 ZNF645Q8N7E2 425 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 NUDCD2Q8WVJ2 157 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 SRSF12Q8WXF0 261 aaKnown RBP15.36■□□□□ 0.05
CLN6-222ENST00000637667 DCSTAMPQ9H295 470 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
CLN6-222ENST00000637667 DAPK2Q9UIK4 370 aa15.36■□□□□ 0.05
CLN6-222ENST00000637667 TMEM235A6NFC5 223 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 SCGNO76038 276 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 TRBV12-3P01733 135 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 OR9G9P0C7N8 305 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 NFYAP23511 347 aaPredicted RBP15.35■□□□□ 0.05
CLN6-222ENST00000637667 SYNJ2BPP57105 145 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 IL34Q6ZMJ4 242 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 OR9G4Q8NGQ1 327 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 ACOT12Q8WYK0 555 aa15.35■□□□□ 0.05
CLN6-222ENST00000637667 RBMX2Q9Y388 322 aaKnown RBP15.35■□□□□ 0.05
CLN6-222ENST00000637667 MPPED1O15442 326 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 FCGR3BO75015 233 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 RBMXL2O75526 392 aaKnown RBP15.34■□□□□ 0.05
CLN6-222ENST00000637667 SLC22A5O76082 557 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 HLA-DQB1P01920 261 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 SAA1P0DJI8 122 aaPredicted RBP15.34■□□□□ 0.05
CLN6-222ENST00000637667 CNIH2Q6PI25 160 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 KCTD9Q7L273 389 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 Q8N1Y9 231 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 LGALS14Q8TCE9 139 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 DCUN1D5Q9BTE7 237 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 Q9H521 79 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 ZNF430Q9H8G1 570 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms