RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CELSR1Q9NYQ6 3014 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 PIGBOS1A0A0B4J2F0 54 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 ARG1P05089 322 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 OR5AN1Q8NGI8 311 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 NABP2Q9BQ15 211 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 COMMD9Q9P000 198 aa17.08■□□□□ 0.33
CLN8-213ENST00000637156 ODF3BA8MYP8 253 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 MPC2O95563 127 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 IGKV1-16P04430 117 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 HOXB4P17483 251 aaPredicted RBP17.07■□□□□ 0.32
CLN8-213ENST00000637156 RNF126Q9BV68 326 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 RNF223E7ERA6 249 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 P0C879 139 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 IL3RAP26951 378 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 KIR2DS2P43631 304 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 AKR1C2P52895 323 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 FGL1Q08830 312 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 RAB32Q13637 225 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 TGIF2LXQ8IUE1 241 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 MAPK1IP1LQ8NDC0 245 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 OR4D5Q8NGN0 318 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 RRNAD1Q96FB5 475 aaKnown RBP17.07■□□□□ 0.32
CLN8-213ENST00000637156 C1orf159Q96HA4 380 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 REG4Q9BYZ8 158 aa17.07■□□□□ 0.32
CLN8-213ENST00000637156 A0A1W2PRD5 423 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 A0A1W2PRF3 423 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 A0A1W2PRM7 423 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 B4DSR2 109 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 H0YIZ8 118 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 H0YJW9 148 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 MSMBP08118 114 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 LOXL1Q08397 574 aaPredicted RBP17.06■□□□□ 0.32
CLN8-213ENST00000637156 C11orf87Q6NUJ2 197 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 PLSCR3Q9NRY6 295 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 MMP24Q9Y5R2 645 aa17.06■□□□□ 0.32
CLN8-213ENST00000637156 PITX3O75364 302 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 CRYZL1O95825 349 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 HTR1DP28221 377 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 LAMTOR1Q6IAA8 161 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 LHFPL4Q7Z7J7 247 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 VKORC1L1Q8N0U8 176 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 OR4S2Q8NH73 311 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 SLC35D1Q9NTN3 355 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 DPM3Q9P2X0 92 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 A0A1B0GU03 582 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 MARCH11A6NNE9 402 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 SNAPC5O75971 98 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 MBPP02686 304 aaPredicted RBP17.05■□□□□ 0.32
CLN8-213ENST00000637156 SLC25A6P12236 298 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 EPHA1P21709 976 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 CXorf66Q5JRM2 361 aaPredicted RBP17.05■□□□□ 0.32
CLN8-213ENST00000637156 RNASE11Q8TAA1 199 aaKnown RBP17.05■□□□□ 0.32
CLN8-213ENST00000637156 LHX4Q969G2 390 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 R3HDM4Q96D70 268 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 Q96MF0 132 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 BOLA1Q9Y3E2 137 aa17.05■□□□□ 0.32
CLN8-213ENST00000637156 AMMECR1Q9Y4X0 333 aaPredicted RBP17.05■□□□□ 0.32
CLN8-213ENST00000637156 ZNF469Q96JG9 3925 aaPredicted RBP17.04■□□□□ 0.32
CLN8-213ENST00000637156 LEUTXA8MZ59 168 aa17.04■□□□□ 0.32
CLN8-213ENST00000637156 GAPDHP04406 335 aaKnown RBP17.04■□□□□ 0.32
CLN8-213ENST00000637156 SPIN2AQ99865 258 aa17.04■□□□□ 0.32
CLN8-213ENST00000637156 SPIN2BQ9BPZ2 258 aa17.04■□□□□ 0.32
CLN8-213ENST00000637156 CACNG5Q9UF02 275 aa17.04■□□□□ 0.32
CLN8-213ENST00000637156 ZANQ9Y493 2812 aa17.04■□□□□ 0.32
CLN8-213ENST00000637156 IGHV1-3A0A0C4DH29 117 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 SRRM4A7MD48 611 aaKnown RBP17.03■□□□□ 0.32
CLN8-213ENST00000637156 ATG12O94817 140 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 SLC25A4P12235 298 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 NQO2P16083 231 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 UBE2E1P51965 193 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 ID3Q02535 119 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 LGALSLQ3ZCW2 172 aaPredicted RBP17.03■□□□□ 0.32
CLN8-213ENST00000637156 FOXRED2Q8IWF2 684 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 RPEQ96AT9 228 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 PRRC2AP48634 2157 aaKnown RBP17.03■□□□□ 0.32
CLN8-213ENST00000637156 FXYD6-FXYD2A0A087WZ82 144 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 SCGB1D2O95969 90 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 TAGLNQ01995 201 aaKnown RBP17.03■□□□□ 0.32
CLN8-213ENST00000637156 SMCO1Q147U7 214 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 RTL8BQ17RB0 113 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 TPTE2P1Q5T6R2 138 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 THOC7Q6I9Y2 204 aaKnown RBP17.03■□□□□ 0.32
CLN8-213ENST00000637156 ZNF767PQ75MW2 155 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 SSX9Q7RTT3 188 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 HIF1ANQ9NWT6 349 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 OR5AC2Q9NZP5 309 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 MBD2Q9UBB5 411 aa17.03■□□□□ 0.32
CLN8-213ENST00000637156 IGHV3-72A0A0B4J1Y9 119 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 HMSDA8MTL9 139 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 H7C2Y5 167 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 KCNAB3O43448 404 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 S100A10P60903 97 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 MIDNQ504T8 468 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 TMEM65Q6PI78 240 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 H2BFWTQ7Z2G1 175 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 ZNF546Q86UE3 836 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 C9orf62Q8N4C0 152 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 THAP6Q8TBB0 222 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 C17orf50Q8WW18 174 aa17.02■□□□□ 0.32
CLN8-213ENST00000637156 HILPDAQ9Y5L2 63 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms