RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 ELOVL1Q9BW60 279 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 CACNA1AO00555 2505 aa12.15□□□□□ -0.46
CLN6-215ENST00000636674 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.47
CLN6-215ENST00000636674 XKRY2A2RUG3 117 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 PAGE4O60829 102 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 TNFSF15O95150 251 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 GRPP07492 148 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 GZMBP10144 247 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 CDC34P49427 236 aaPredicted RBP12.15□□□□□ -0.47
CLN6-215ENST00000636674 RTP5Q14D33 572 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 TMEM164Q5U3C3 297 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.47
CLN6-215ENST00000636674 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 NECAP1Q8NC96 275 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 OR2T10Q8NGZ9 312 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 BTF3L4Q96K17 158 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 RHOVQ96L33 236 aa12.15□□□□□ -0.47
CLN6-215ENST00000636674 TRGV5A0A0B4J1U4 118 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 C15orf62A8K5M9 175 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 TM4SF5O14894 197 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 PDE6DO43924 150 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 GCGP01275 180 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 FOSL1P15407 271 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 CD46P15529 392 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 AESQ08117 197 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 ZDHHC11Q9H8X9 412 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 MED13Q9UHV7 2174 aa12.14□□□□□ -0.47
CLN6-215ENST00000636674 A0A087X0M5 115 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 A0A1B0GX30 115 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 C11orf94C9JXX5 98 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 TUBG1P23258 451 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 SSTP61278 116 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 P2RY6Q15077 328 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 KCNIP4Q6PIL6 250 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 TRAT1Q6PIZ9 186 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 VASH2Q86V25 355 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 KLF14Q8TD94 323 aaPredicted RBP12.13□□□□□ -0.47
CLN6-215ENST00000636674 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 LINC00473A8K010 186 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 MPDU1O75352 247 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 NPPCP23582 126 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 MPV17P39210 176 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 HTD2P86397 168 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 HNF4GQ14541 408 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
CLN6-215ENST00000636674 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
CLN6-215ENST00000636674 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
CLN6-215ENST00000636674 TXNDC17Q9BRA2 123 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 DEFB127Q9H1M4 99 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 KCNIP2Q9NS61 270 aa12.13□□□□□ -0.47
CLN6-215ENST00000636674 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 FREM2Q5SZK8 3169 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 F6UZH7 168 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 WNT9BO14905 357 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 GABRA2P47869 451 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 PMP22Q01453 160 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 PDLIM3Q53GG5 364 aaPredicted RBP12.12□□□□□ -0.47
CLN6-215ENST00000636674 BTNL3Q6UXE8 466 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 WDR82Q6UXN9 313 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 Q6ZR03 302 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 TMEM144Q7Z5S9 345 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 LINC01551Q86U37 167 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 TUBG2Q9NRH3 451 aa12.12□□□□□ -0.47
CLN6-215ENST00000636674 DIDO1Q9BTC0 2240 aaKnown RBP12.12□□□□□ -0.47
CLN6-215ENST00000636674 ADH4P08319 380 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 RNFT1Q5M7Z0 435 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 WASF3Q9UPY6 502 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 C15orf65H3BRN8 121 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 KITLGP21583 273 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 CD1BP29016 333 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 SSTR5P35346 364 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 GNB1P62873 340 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 TLE1Q04724 770 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 Q3ZCU0 254 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 ZNF826PQ6ZT77 177 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 Q6ZT83 130 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 OR13A1Q8NGR1 328 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 OR52E5Q8NH55 327 aa12.11□□□□□ -0.47
CLN6-215ENST00000636674 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms