RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 BVESQ8NE79 360 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 STUB1Q9UNE7 303 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 SSR3Q9UNL2 185 aa13.85□□□□□ -0.19
PNKP-225ENST00000636214 ZP3P21754 424 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 CDNFQ49AH0 187 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 TMEM177Q53S58 311 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 TPRA1Q86W33 373 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 OR5T1Q8NG75 326 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 RHOVQ96L33 236 aa13.84□□□□□ -0.19
PNKP-225ENST00000636214 RANGRFQ9HD47 186 aaPredicted RBP13.84□□□□□ -0.19
PNKP-225ENST00000636214 MPPED1O15442 326 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 CREBL2O60519 120 aaPredicted RBP13.83□□□□□ -0.2
PNKP-225ENST00000636214 ACTL6BO94805 426 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 ATP6V1G2O95670 118 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 CRYZL1O95825 349 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 IGLV2-23P01705 113 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 CTXN2P0C2S0 81 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 ACSM6Q6P461 480 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 Q6ZS49 121 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 H1FOOQ8IZA3 346 aaPredicted RBP13.83□□□□□ -0.2
PNKP-225ENST00000636214 ASCL2Q99929 193 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 RSRP1Q9BUV0 290 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 YTHDF1Q9BYJ9 559 aaKnown RBP13.83□□□□□ -0.2
PNKP-225ENST00000636214 TXNL4BQ9NX01 149 aaKnown RBP13.83□□□□□ -0.2
PNKP-225ENST00000636214 COA4Q9NYJ1 87 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 DAPK2Q9UIK4 370 aa13.83□□□□□ -0.2
PNKP-225ENST00000636214 TNCP24821 2201 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 CD36P16671 472 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 AADACP22760 399 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 FGF9P31371 208 aaPredicted RBP13.82□□□□□ -0.2
PNKP-225ENST00000636214 GNG2P59768 71 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 PJVKQ0ZLH3 352 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 HACD4Q5VWC8 232 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 SPARTQ8N0X7 666 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 DCUN1D5Q9BTE7 237 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 MRPS7Q9Y2R9 242 aaKnown RBP13.82□□□□□ -0.2
PNKP-225ENST00000636214 PRELID3BQ9Y3B1 194 aa13.82□□□□□ -0.2
PNKP-225ENST00000636214 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
PNKP-225ENST00000636214 ANKRD34BA5PLL1 514 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 J3QRK9 145 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 SLC22A5O76082 557 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 GP9P14770 177 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 SPNP16150 400 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 DUTP33316 252 aaKnown RBP13.81□□□□□ -0.2
PNKP-225ENST00000636214 UBE2KP61086 200 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 TNXAQ16473 311 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 ANKRD13BQ86YJ7 626 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 ZNF645Q8N7E2 425 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 TEX45Q8NA69 505 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 OSR1Q8TAX0 266 aaPredicted RBP13.81□□□□□ -0.2
PNKP-225ENST00000636214 ACOT12Q8WYK0 555 aa13.81□□□□□ -0.2
PNKP-225ENST00000636214 CRYGBP07316 175 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 SNRPBP14678 240 aaKnown RBP13.8□□□□□ -0.2
PNKP-225ENST00000636214 SFXN4Q6P4A7 337 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 NR2C2APQ86WQ0 139 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 NUDCD2Q8WVJ2 157 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 C5orf30Q96GV9 206 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 OR2W1Q9Y3N9 320 aa13.8□□□□□ -0.2
PNKP-225ENST00000636214 TMEM235A6NFC5 223 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 TUSC2O75896 110 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 TATDN3Q17R31 274 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 KCTD9Q7L273 389 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 LGALS14Q8TCE9 139 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 USMG5Q96IX5 58 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 TINAGL1Q9GZM7 467 aaPredicted RBP13.79□□□□□ -0.2
PNKP-225ENST00000636214 ELF5Q9UKW6 265 aaPredicted RBP13.79□□□□□ -0.2
PNKP-225ENST00000636214 NBEAL2Q6ZNJ1 2754 aa13.79□□□□□ -0.2
PNKP-225ENST00000636214 STAB2Q8WWQ8 2551 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 IGKV1D-8A0A087WSZ0 117 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 SRRM4A7MD48 611 aaKnown RBP13.78□□□□□ -0.2
PNKP-225ENST00000636214 LINC00473A8K010 186 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 FCGR3BO75015 233 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 APELAP0DMC3 54 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 NFYAP23511 347 aaPredicted RBP13.78□□□□□ -0.2
PNKP-225ENST00000636214 PRSS8Q16651 343 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 ZNF773Q6PK81 442 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 SRSF12Q8WXF0 261 aaKnown RBP13.78□□□□□ -0.2
PNKP-225ENST00000636214 DDB2Q92466 427 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 RHBDL2Q9NX52 303 aa13.78□□□□□ -0.2
PNKP-225ENST00000636214 LOC100506127A0A0U1RQW1 187 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 SDC2P34741 201 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 ARPC4P59998 168 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 SSBP2P81877 361 aaPredicted RBP13.77□□□□□ -0.21
PNKP-225ENST00000636214 MXD1Q05195 221 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 IDO2Q6ZQW0 420 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 MMD2Q8IY49 270 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 TCTEX1D2Q8WW35 142 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 SPIN2AQ99865 258 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 SPIN2BQ9BPZ2 258 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 PEF1Q9UBV8 284 aaKnown RBP13.77□□□□□ -0.21
PNKP-225ENST00000636214 ANXA10Q9UJ72 324 aa13.77□□□□□ -0.21
PNKP-225ENST00000636214 RBMX2Q9Y388 322 aaKnown RBP13.77□□□□□ -0.21
PNKP-225ENST00000636214 BRI3O95415 125 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 HLA-DQB1P01920 261 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 OR9G9P0C7N8 305 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 SAA1P0DJI8 122 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms