RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 H0YIZ8 118 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 DIRAS3O95661 229 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 AVPP01185 164 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 HOXB4P17483 251 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-208ENST00000634934 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-208ENST00000634934 FLI1Q01543 452 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-208ENST00000634934 MORN2Q502X0 79 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 KCTD9Q7L273 389 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 LRTM2Q8N967 370 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 CASTOR1Q8WTX7 329 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 DCUN1D4Q92564 292 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 TNFRSF14Q92956 283 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 SLC5A7Q9GZV3 580 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
LINC00339-208ENST00000634934 PSG11Q9UQ72 335 aa11.78□□□□□ -0.52
LINC00339-208ENST00000634934 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 IGHV2-26A0A0B4J1V2 119 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 A0A1W2PPE3 182 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 A0A1W2PRD5 423 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 A0A1W2PRF3 423 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 A0A1W2PRM7 423 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 RNASEK-C17orf49H0YIS7 233 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 TSPAN4O14817 238 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 YPEL1O60688 119 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 APOC3P02656 99 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 FCGR2CP31995 323 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 GALNT14Q96FL9 552 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 YPEL2Q96QA6 119 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 CLEC7AQ9BXN2 247 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 SEC11CQ9BY50 192 aa11.77□□□□□ -0.52
LINC00339-208ENST00000634934 PARP12Q9H0J9 701 aaKnown RBP11.77□□□□□ -0.52
LINC00339-208ENST00000634934 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.52
LINC00339-208ENST00000634934 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-208ENST00000634934 A0A087X0M5 115 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 A0A1B0GX30 115 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 FAM25EA8MYX2 175 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 IFNA2P01563 188 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 PAX6P26367 422 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 UCP3P55916 312 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 HCP5Q6MZN7 132 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 H1FOOQ8IZA3 346 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 OR1S2Q8NGQ3 325 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ZNF2Q9BSG1 426 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 NIPBLQ6KC79 2804 aaeCLIP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 CUBNO60494 3623 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 CENPVL3A0A0U1RRI6 287 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 CRYM-AS1A6NIL9 109 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 J3QR06 171 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 SLC31A2O15432 143 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ARG1P05089 322 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 AADACP22760 399 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 PRRX1P54821 245 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 DHRS7BQ6IAN0 325 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-208ENST00000634934 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 LYPD6BQ8NI32 183 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 EDARADDQ8WWZ3 215 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ABHD14AQ9BUJ0 271 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 PRELID1Q9Y255 219 aa11.76□□□□□ -0.53
LINC00339-208ENST00000634934 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 OR8U9P0C7N5 309 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 UBE2E1P51965 193 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 ZNF134P52741 427 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 FXYD4P59646 89 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 HERV-K104P61576 105 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 CT45A1Q5HYN5 189 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 OR11H6Q8NGC7 330 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 OR8U1Q8NH10 309 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 CT45A3Q8NHU0 189 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
LINC00339-208ENST00000634934 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
LINC00339-208ENST00000634934 C13orf42A0A1B0GVH6 325 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 TUSC2O75896 110 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 JTBO76095 146 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 PPYP01298 95 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 SULT1A2P50226 295 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 CAV2P51636 162 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 Q3ZCU0 254 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 SLC25A48Q6ZT89 311 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms