RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 MS4A3Q96HJ5 214 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 QTRT1Q9BXR0 403 aaKnown RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ST6GALNAC2Q9UJ37 374 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 PATJQ8NI35 1801 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ZNF831Q5JPB2 1677 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 FOXI3A8MTJ6 420 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ZNHIT1O43257 154 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 RAG2P55895 527 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 LDLRAD2Q5SZI1 272 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 SAMD13Q5VXD3 122 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 C17orf47Q8NEP4 570 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ABHD17AQ96GS6 310 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 PTP4A3O75365 173 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 EFNB2P52799 333 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 C3orf36Q3SXR2 165 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 CLEC18BQ6UXF7 455 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 PPP1R27Q86WC6 154 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 SAP25Q8TEE9 199 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 AKIRIN1Q9H9L7 192 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 RCC2Q9P258 522 aaKnown RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 CTXND1A0A1B0GTU2 59 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 RNASE4P34096 147 aaKnown RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 LY6DQ14210 128 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 WDR34Q96EX3 536 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 LNP1A1A4G5 178 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 TSPAN13O95857 204 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ASCL4Q6XD76 172 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 Q6ZNX1 250 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 BEX4Q9NWD9 120 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 SEMA5BQ9P283 1151 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 MMP9P14780 707 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 CNTFRP26992 372 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 ASIPP42127 132 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 EWSR1Q01844 656 aaKnown RBP eCLIP5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 AANATQ16613 207 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 FDCSPQ8NFU4 85 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 RAB24Q969Q5 203 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 SLC25A28Q96A46 364 aa5.54□□□□□ -1.52
SRGAP1-207ENST00000631006 PLXNA1Q9UIW2 1896 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ALX3O95076 343 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 GHRHP01286 108 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 CDKN1AP38936 164 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TMEM42Q69YG0 159 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 DNASE2BQ8WZ79 361 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 WNT5BQ9H1J7 359 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 COL6A6A6NMZ7 2263 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 C19orf67A6NJJ6 358 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 C1QAP02745 245 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 CYB5R2Q6BCY4 276 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 C11orf44Q8N8P7 122 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 LEAP2Q969E1 77 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TMEM45BQ96B21 275 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TMEM70Q9BUB7 260 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 COL18A1P39060 1754 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGHV3OR16-13A0A075B7E8 117 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 LOC102723996A0A087X1L8 192 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGHV3-74A0A0B4J1X5 117 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGHV3-35A0A0C4DH35 117 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ZNF729A6NN14 1252 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGKV1D-33P01593 117 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGKV1-33P01594 117 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 CACNA1BQ00975 2339 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ERASQ7Z444 233 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TRAV8-7A0A075B6U6 113 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 IGHV3-49A0A0A0MS15 119 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 PRR32B1ATL7 298 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 DIRC3C9JPN6 131 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 CRHP06850 196 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FAM24BQ8N5W8 94 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FAM131CQ96AQ9 280 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 SDF2L1Q9HCN8 221 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 KCNK7Q9Y2U2 307 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TRGV4A0A0C4DH28 118 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 MVDP53602 400 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FGF12P61328 243 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 BSPH1Q075Z2 132 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 C1QTNF12Q5T7M4 302 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 DPPA3Q6W0C5 159 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 KLF14Q8TD94 323 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FRRS1LQ9P0K9 344 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 A0A1W2PQM1 296 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ODAMA1E959 279 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 EREGO14944 169 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 MYOD1P15172 320 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 LEPP41159 167 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TMEM30BQ3MIR4 351 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 ZNF880Q6PDB4 577 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 RTN4RL2Q86UN3 420 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 CNOT1A5YKK6 2376 aaKnown RBP5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 TRBV7-9A0A0J9YWB2 115 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 SAP30O75446 220 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FUCA1P04066 466 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 DSCR9P59020 149 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 INSL4Q14641 139 aa5.53□□□□□ -1.52
SRGAP1-207ENST00000631006 FAM57AQ8TBR7 257 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms