RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 PLSCR3Q9NRY6 295 aa15.21■□□□□ 0.03
SQSTM1-216ENST00000626660 SCP2D1Q9UJQ7 156 aa15.21■□□□□ 0.03
SQSTM1-216ENST00000626660 MMP24Q9Y5R2 645 aa15.21■□□□□ 0.03
SQSTM1-216ENST00000626660 CLPSL1A2RUU4 121 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 FCGR3BO75015 233 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 IGKV1-16P04430 117 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 AMY1AP04745 511 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 ZNF735P0CB33 412 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 MDKP21741 143 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 ECI1P42126 302 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 LGALS7P47929 136 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 PPP5CP53041 499 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 EIF4EBP1Q13541 118 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 Q8N2B8 174 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 Q8N9W7 124 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 POC5Q8NA72 575 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 NPBQ8NG41 125 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 LINC01006Q8NI28 216 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 ZFAND1Q8TCF1 268 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 RITA1Q96K30 269 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 RSRP1Q9BUV0 290 aa15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 LIN7CQ9NUP9 197 aaKnown RBP15.2■□□□□ 0.02
SQSTM1-216ENST00000626660 SHOXO15266 292 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 PEX14O75381 377 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 SPDEFO95238 335 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 CRYZL1O95825 349 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 CNTFRP26992 372 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 COMPP49747 757 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 PLGLAQ15195 96 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 BAK1Q16611 211 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 TMEM177Q53S58 311 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 AWAT1Q58HT5 328 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 OR2B11Q5JQS5 317 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 C12orf54Q6X4T0 127 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 FAM71E2Q8N5Q1 922 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 OR51S1Q8NGJ8 323 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 OR51H1Q8NH63 302 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 OR4S2Q8NH73 311 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 ZNF486Q96H40 463 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 GPHA2Q96T91 129 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
SQSTM1-216ENST00000626660 SH2D7A6NKC9 451 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 RRHO14718 337 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 PGLYRP1O75594 196 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 NDUFA3O95167 84 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 RLN1P04808 185 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 VDAC2P45880 294 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 C5orf64Q2M2E5 130 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 PHLDA2Q53GA4 152 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 OSR1Q8TAX0 266 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 SDHCQ99643 169 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 HRASLSQ9HDD0 168 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 SLC2A8Q9NY64 477 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 SIGLEC9Q9Y336 463 aa15.18■□□□□ 0.02
SQSTM1-216ENST00000626660 HAX1O00165 279 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 PSG5Q15238 335 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 SURF2Q15527 256 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 IDO2Q6ZQW0 420 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 SPAG16Q8N0X2 631 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 MARCH1Q8TCQ1 289 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 CD300LFQ8TDQ1 290 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 SCGB3A2Q96PL1 93 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 CCDC32Q9BV29 185 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 WDR12Q9GZL7 423 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 FBXL15Q9H469 300 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 METTL1Q9UBP6 276 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 C14orf166Q9Y224 244 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 STAB1Q9NY15 2570 aa15.17■□□□□ 0.02
SQSTM1-216ENST00000626660 RBFOX2O43251 390 aaKnown RBP eCLIP15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 IL7P13232 177 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 ZNF846Q147U1 533 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 VMA21Q3ZAQ7 101 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 LIN54Q6MZP7 749 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 Q6ZS46 218 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 SLC35E3Q7Z769 313 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 TCTEX1D1Q8N7M0 179 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 CCDC71LQ8N9Z2 235 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 OR13C8Q8NGS7 320 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 SLC2A9Q9NRM0 540 aa15.16■□□□□ 0.02
SQSTM1-216ENST00000626660 CENPXA8MT69 81 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 KCNAB3O43448 404 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 SLC25A17O43808 307 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 HLA-DRB1P01911 266 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 CTSDP07339 412 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 PI3P19957 117 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 CD40LGP29965 261 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 RND3P61587 244 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 TBC1D26Q86UD7 250 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 AIFM2Q9BRQ8 373 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 COPZ2Q9P299 210 aa15.15■□□□□ 0.02
SQSTM1-216ENST00000626660 PLXNB1O43157 2135 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 LINC00854A0A1B0GVQ3 168 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 NAP1L6A6NFF2 107 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 HRASP01112 189 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 IGLV2-23P01705 113 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 IGHG2P01859 326 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 F2RP25116 425 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 PIGPP57054 158 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 UBE2KP61086 200 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms