RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CCKARP32238 428 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 DMKNQ6E0U4 476 aaPredicted RBP9.43□□□□□ -0.9
VPS8-227ENST00000625842 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
VPS8-227ENST00000625842 ACP7Q6ZNF0 438 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TBL2Q9Y4P3 447 aaKnown RBP9.43□□□□□ -0.9
VPS8-227ENST00000625842 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 OIP5O43482 229 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 BCL2L11O43521 198 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 MSMBP08118 114 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TWIST1Q15672 202 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 VWCEQ96DN2 955 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 TMEM133Q9H2Q1 129 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 ANOS1P23352 680 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 OR2D3Q8NGH3 330 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
VPS8-227ENST00000625842 TRIP11Q15643 1979 aa9.43□□□□□ -0.9
VPS8-227ENST00000625842 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 FSTP19883 344 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 PSMB2P49721 201 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 RNASEKQ6P5S7 137 aaKnown RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 CTHRC1Q96CG8 243 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 DSPPQ9NZW4 1301 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 CELA3AP09093 270 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 PMCHP20382 165 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 LHX2P50458 406 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 FOXL2P58012 376 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 CGB2Q6NT52 195 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 OR9G4Q8NGQ1 327 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 TNFSF13O75888 250 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 NPBWR2P48146 333 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 ADIPOQQ15848 244 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 C11orf87Q6NUJ2 197 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 MRPL32Q9BYC8 188 aaKnown RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 PARP12Q9H0J9 701 aaKnown RBP9.42□□□□□ -0.9
VPS8-227ENST00000625842 SOCS1O15524 211 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 IGKV1D-16P01601 117 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 IGHMP01871 453 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 IL4P05112 153 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 AGAP20933 346 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 MALP21145 153 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 UNC119Q13432 240 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 TMEM155Q4W5P6 130 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 RMI2Q96E14 147 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 WFIKKN1Q96NZ8 548 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 SLC50A1Q9BRV3 221 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 DNAJC4Q9NNZ3 241 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 TCHHQ07283 1943 aa9.42□□□□□ -0.9
VPS8-227ENST00000625842 CAMPP49913 170 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 IGFL3Q6UXB1 125 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 ABCA7Q8IZY2 2146 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 IGKV1-8A0A0C4DH67 115 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 C9orf170A2RU37 121 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 MBD3L4A6NDZ8 208 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 MBD3L3A6NE82 208 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 MBD3L5A6NJ08 208 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 CDX1P47902 265 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 POLR2GP62487 172 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS8-227ENST00000625842 OR10G8Q8NGN5 311 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 MBD3L2Q8NHZ7 208 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 RNF5Q99942 180 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 FRRS1LQ9P0K9 344 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 PSG2P11465 335 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 ASIPP42127 132 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 PCM1Q15154 2024 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 A0A087WX48 190 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 KIAA0141Q14154 515 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 PRSS8Q16651 343 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 CR1LQ2VPA4 569 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 GLDNQ6ZMI3 551 aaPredicted RBP9.41□□□□□ -0.9
VPS8-227ENST00000625842 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 FBXL15Q9H469 300 aa9.41□□□□□ -0.9
VPS8-227ENST00000625842 APOC4P55056 127 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 SERF2P84101 59 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS8-227ENST00000625842 CTF1Q16619 201 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 USMG5Q96IX5 58 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 NEU1Q99519 415 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms