RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 SLC22A5O76082 557 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 CRYGBP07316 175 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 LUMP51884 338 aaPredicted RBP11.5□□□□□ -0.57
LINC00643-206ENST00000623985 GNB1P62873 340 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 BVESQ8NE79 360 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 LFNGQ8NES3 379 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 SORL1Q92673 2214 aa11.5□□□□□ -0.57
LINC00643-206ENST00000623985 WI2-2373I1.2A0A1W2PRP0 233 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
LINC00643-206ENST00000623985 AIREO43918 545 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 LGALS1P09382 135 aaKnown RBP11.49□□□□□ -0.57
LINC00643-206ENST00000623985 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-206ENST00000623985 CD40LGP29965 261 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 SSBP2P81877 361 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-206ENST00000623985 FXYD3Q14802 87 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 VMA21Q3ZAQ7 101 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 ASPHD1Q5U4P2 390 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-206ENST00000623985 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 OR5B12Q96R08 314 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
LINC00643-206ENST00000623985 TRAV18A0A075B6X5 111 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 H3BUA1 57 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 RAMP3O60896 148 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 CNIH1O95406 144 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 CRYZL1O95825 349 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 TGFBR1P36897 503 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 TPPP2P59282 170 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 ARPC4P59998 168 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 UBE2KP61086 200 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 DGCR2P98153 550 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 DCTN2Q13561 401 aaKnown RBP11.48□□□□□ -0.57
LINC00643-206ENST00000623985 OVCH2Q7RTZ1 564 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 BEST4Q8NFU0 473 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 CASTOR1Q8WTX7 329 aa11.48□□□□□ -0.57
LINC00643-206ENST00000623985 MRPS7Q9Y2R9 242 aaKnown RBP11.48□□□□□ -0.57
LINC00643-206ENST00000623985 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 SRRM4A7MD48 611 aaKnown RBP11.47□□□□□ -0.57
LINC00643-206ENST00000623985 J3QRK9 145 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 TUSC2O75896 110 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 POC5Q8NA72 575 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 TMEM68Q96MH6 324 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
LINC00643-206ENST00000623985 AUNIPQ9H7T9 357 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
LINC00643-206ENST00000623985 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
LINC00643-206ENST00000623985 TRIM64CA6NLI5 447 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 LINC01619G3V211 115 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 CREBL2O60519 120 aaPredicted RBP11.46□□□□□ -0.57
LINC00643-206ENST00000623985 CBX5P45973 191 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 INSL3P51460 131 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 GVQW1Q8N7I0 195 aa11.46□□□□□ -0.57
LINC00643-206ENST00000623985 HSD17B10Q99714 261 aaKnown RBP11.46□□□□□ -0.57
LINC00643-206ENST00000623985 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 A0A087WW49 117 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 OVOL1O14753 267 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 XRCC3O43542 346 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 FCGR3BO75015 233 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 TRGV3P03979 118 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 SAA1P0DJI8 122 aaPredicted RBP11.45□□□□□ -0.58
LINC00643-206ENST00000623985 RPS19P39019 145 aaKnown RBP11.45□□□□□ -0.58
LINC00643-206ENST00000623985 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
LINC00643-206ENST00000623985 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
LINC00643-206ENST00000623985 CDK10Q15131 360 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 MSMO1Q15800 293 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 OR13F1Q8NGS4 319 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 PHB2Q99623 299 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
LINC00643-206ENST00000623985 BRI3O95415 125 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 AADACP22760 399 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 SLURP1P55000 103 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
LINC00643-206ENST00000623985 TNXAQ16473 311 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 PRSS8Q16651 343 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 ZNF66Q6ZN08 573 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
LINC00643-206ENST00000623985 ACOT12Q8WYK0 555 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 SNAPC3Q92966 411 aa11.44□□□□□ -0.58
LINC00643-206ENST00000623985 SLC25A46Q96AG3 418 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms