RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 SLC22A5O76082 557 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 CRYGBP07316 175 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 LUMP51884 338 aaPredicted RBP11.5□□□□□ -0.57
LINC00643-205ENST00000623219 GNB1P62873 340 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 BVESQ8NE79 360 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 LFNGQ8NES3 379 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 SORL1Q92673 2214 aa11.5□□□□□ -0.57
LINC00643-205ENST00000623219 WI2-2373I1.2A0A1W2PRP0 233 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
LINC00643-205ENST00000623219 AIREO43918 545 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 LGALS1P09382 135 aaKnown RBP11.49□□□□□ -0.57
LINC00643-205ENST00000623219 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-205ENST00000623219 CD40LGP29965 261 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 SSBP2P81877 361 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-205ENST00000623219 FXYD3Q14802 87 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 VMA21Q3ZAQ7 101 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 ASPHD1Q5U4P2 390 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 KCTD9Q7L273 389 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
LINC00643-205ENST00000623219 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 OR5B12Q96R08 314 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
LINC00643-205ENST00000623219 TRAV18A0A075B6X5 111 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 H3BUA1 57 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 RAMP3O60896 148 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 CNIH1O95406 144 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 CRYZL1O95825 349 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 TGFBR1P36897 503 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 TPPP2P59282 170 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 ARPC4P59998 168 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 UBE2KP61086 200 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 DGCR2P98153 550 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 DCTN2Q13561 401 aaKnown RBP11.48□□□□□ -0.57
LINC00643-205ENST00000623219 OVCH2Q7RTZ1 564 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 BEST4Q8NFU0 473 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 CASTOR1Q8WTX7 329 aa11.48□□□□□ -0.57
LINC00643-205ENST00000623219 MRPS7Q9Y2R9 242 aaKnown RBP11.48□□□□□ -0.57
LINC00643-205ENST00000623219 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 SRRM4A7MD48 611 aaKnown RBP11.47□□□□□ -0.57
LINC00643-205ENST00000623219 J3QRK9 145 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 TUSC2O75896 110 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 POC5Q8NA72 575 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 TMEM68Q96MH6 324 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
LINC00643-205ENST00000623219 AUNIPQ9H7T9 357 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
LINC00643-205ENST00000623219 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
LINC00643-205ENST00000623219 TRIM64CA6NLI5 447 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 LINC01619G3V211 115 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 CREBL2O60519 120 aaPredicted RBP11.46□□□□□ -0.57
LINC00643-205ENST00000623219 CBX5P45973 191 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 INSL3P51460 131 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 GVQW1Q8N7I0 195 aa11.46□□□□□ -0.57
LINC00643-205ENST00000623219 HSD17B10Q99714 261 aaKnown RBP11.46□□□□□ -0.57
LINC00643-205ENST00000623219 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 A0A087WW49 117 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 OVOL1O14753 267 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 XRCC3O43542 346 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 FCGR3BO75015 233 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 TRGV3P03979 118 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 SAA1P0DJI8 122 aaPredicted RBP11.45□□□□□ -0.58
LINC00643-205ENST00000623219 RPS19P39019 145 aaKnown RBP11.45□□□□□ -0.58
LINC00643-205ENST00000623219 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
LINC00643-205ENST00000623219 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
LINC00643-205ENST00000623219 CDK10Q15131 360 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 MSMO1Q15800 293 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 OR13F1Q8NGS4 319 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 PHB2Q99623 299 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
LINC00643-205ENST00000623219 BRI3O95415 125 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 AADACP22760 399 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 SLURP1P55000 103 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
LINC00643-205ENST00000623219 TNXAQ16473 311 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 PRSS8Q16651 343 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 ZNF66Q6ZN08 573 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
LINC00643-205ENST00000623219 ACOT12Q8WYK0 555 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 SNAPC3Q92966 411 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 SLC25A46Q96AG3 418 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms