RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 HIPK2Q9H2X6 1198 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 RBKSQ9H477 322 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 C19orf12Q9NSK7 152 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 RALYQ9UKM9 306 aaKnown RBP13.46□□□□□ -0.26
LDB3-208ENST00000623007 TLN1Q9Y490 2541 aaKnown RBP13.46□□□□□ -0.26
LDB3-208ENST00000623007 KMT2BQ9UMN6 2715 aaPredicted RBP13.46□□□□□ -0.26
LDB3-208ENST00000623007 SIAH2O43255 324 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 PROP1O75360 226 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 CST7O76096 145 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 PRH1P02810 166 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 CAMLGP49069 296 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 CLINT1Q14677 625 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 DUX4L9Q6RFH8 374 aaPredicted RBP13.45□□□□□ -0.26
LDB3-208ENST00000623007 DTX2Q86UW9 622 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 SMDT1Q9H4I9 107 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
LDB3-208ENST00000623007 ACACBO00763 2458 aa13.45□□□□□ -0.26
LDB3-208ENST00000623007 EPG5Q9HCE0 2579 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 APOA2P02652 100 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ATP5IP56385 69 aaPredicted RBP13.44□□□□□ -0.26
LDB3-208ENST00000623007 SERF2P84101 59 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 RPL39P5Q59GN2 51 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 Q6ZRG5 221 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ZNF833PQ6ZTB9 187 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 LILRB2Q8N423 598 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 HSD17B11Q8NBQ5 300 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 OR2G3Q8NGZ4 309 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 OR9G1Q8NH87 305 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 FKBP11Q9NYL4 201 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ATP6V0CP27449 155 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 ZNF273Q14593 569 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 SPANXN5Q5MJ07 72 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 FAM53AQ6NSI3 398 aaPredicted RBP13.44□□□□□ -0.26
LDB3-208ENST00000623007 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 TMEM217Q8N7C4 229 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 OR10P1Q8NGE3 313 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 OSR1Q8TAX0 266 aaPredicted RBP13.44□□□□□ -0.26
LDB3-208ENST00000623007 PCGF1Q9BSM1 259 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 TIMM9Q9Y5J7 89 aa13.44□□□□□ -0.26
LDB3-208ENST00000623007 PIEZO2Q9H5I5 2752 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 CEBPZOSA8MTT3 80 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 NXPH3O95157 252 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 TSPAN15O95858 294 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 IAPPP10997 89 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 ZNF137PP52743 207 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 TLE4Q04727 773 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 IZUMO4Q1ZYL8 232 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 AKR1C8PQ5T2L2 129 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 C11orf71Q6IPW1 123 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 OR8B3Q8NGG8 313 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
LDB3-208ENST00000623007 OR8B2Q96RD0 313 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 GGACTQ9BVM4 153 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 PRNDQ9UKY0 176 aa13.43□□□□□ -0.26
LDB3-208ENST00000623007 HCFC1P51610 2035 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 DMXL2Q8TDJ6 3036 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 SLC31A2O15432 143 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 IFNA17P01571 189 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 HBE1P02100 147 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 M6PRP20645 277 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 RAB13P51153 203 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 GNB2P62879 340 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 CLEC9AQ6UXN8 241 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 ZNF295-AS1Q8N0V1 137 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 OR10X1Q8NGY0 326 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 VSTM2AQ8TAG5 236 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 C8orf46Q8TAG6 207 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 ITLN2Q8WWU7 325 aaPredicted RBP13.42□□□□□ -0.26
LDB3-208ENST00000623007 NEIL1Q96FI4 390 aaPredicted RBP13.42□□□□□ -0.26
LDB3-208ENST00000623007 HRH4Q9H3N8 390 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 SLC35D1Q9NTN3 355 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 TMEM140Q9NV12 185 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 CTSZQ9UBR2 303 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 FOXA2Q9Y261 457 aaPredicted RBP13.42□□□□□ -0.26
LDB3-208ENST00000623007 ZNF257Q9Y2Q1 563 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 PCNX1Q96RV3 2341 aa13.42□□□□□ -0.26
LDB3-208ENST00000623007 CHD8Q9HCK8 2581 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 MEX3AA1L020 520 aaKnown RBP13.41□□□□□ -0.26
LDB3-208ENST00000623007 MC5RP33032 325 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 GNG10P50151 68 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 PRRX1P54821 245 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 SLC38A11Q08AI6 406 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 LYPD2Q6UXB3 125 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 RHOVQ96L33 236 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 TMEM147Q9BVK8 224 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 IGF2RP11717 2491 aa13.41□□□□□ -0.26
LDB3-208ENST00000623007 H3BP45 60 aa13.4□□□□□ -0.26
LDB3-208ENST00000623007 J3QR06 171 aa13.4□□□□□ -0.26
LDB3-208ENST00000623007 PPIHO43447 177 aaKnown RBP13.4□□□□□ -0.26
LDB3-208ENST00000623007 CRYZL1O95825 349 aa13.4□□□□□ -0.26
LDB3-208ENST00000623007 METTL15P1P0C7V9 234 aa13.4□□□□□ -0.26
LDB3-208ENST00000623007 DVL1P1P54792 670 aaPredicted RBP13.4□□□□□ -0.26
LDB3-208ENST00000623007 PEA15Q15121 130 aa13.4□□□□□ -0.26
LDB3-208ENST00000623007 CDSNQ15517 529 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms