RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 SLC23A3Q6PIS1 610 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 TCTEX1D1Q8N7M0 179 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 LRRC3CA6NJW4 275 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 CD99P14209 185 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 IL3RAP26951 378 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 HERV-K104P63124 156 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 GNMTQ14749 295 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 ZNF611Q8N823 705 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.72
LITAF-221ENST00000622633 WDYHV1Q96HA8 205 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 SIGMAR1Q99720 223 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 IL36GQ9NZH8 169 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 OR51B2Q9Y5P1 312 aa10.52□□□□□ -0.72
LITAF-221ENST00000622633 ZNF816-ZNF321PA0A0X1KG74 233 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 NKX2-6A6NCS4 301 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 ZFP92A6NM28 416 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 NTN3O00634 580 aaPredicted RBP10.52□□□□□ -0.73
LITAF-221ENST00000622633 PPYP01298 95 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 HBE1P02100 147 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 ADMP35318 185 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
LITAF-221ENST00000622633 TMEM177Q53S58 311 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 TMEM211Q6ICI0 200 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 SUMF1Q8NBK3 374 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 GPHA2Q96T91 129 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 ATP5SQ99766 215 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 DEPPQ9NTK1 212 aa10.52□□□□□ -0.73
LITAF-221ENST00000622633 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
LITAF-221ENST00000622633 C3orf85A0A1B0GTC6 90 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 FAM24AA6NFZ4 105 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 MPPED1O15442 326 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 BCL2P10415 239 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 CCNOP22674 350 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 S100GP29377 79 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 TIMP3P35625 211 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 PCBD1P61457 104 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 OR8B8Q15620 311 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 CYP2G1PQ6ZSU1 146 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 NEGR1Q7Z3B1 354 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 PPP1R32Q7Z5V6 425 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 CCDC71LQ8N9Z2 235 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 ABHD17AQ96GS6 310 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 OR51I2Q9H344 312 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 SPAARA0A1B0GVQ0 90 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 PINLYPA6NC86 204 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 SRP14P37108 136 aaKnown RBP10.51□□□□□ -0.73
LITAF-221ENST00000622633 RAB31Q13636 194 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 FREM2Q5SZK8 3169 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 PLA2G3Q9NZ20 509 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 ZNF391Q9UJN7 358 aa10.51□□□□□ -0.73
LITAF-221ENST00000622633 TSPAN13O95857 204 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 HAND1O96004 215 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 CCL2P13500 99 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 LCN2P80188 198 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 SLC7A10Q9NS82 523 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 NCKAP5O14513 1909 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 A0A096LPE4 126 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 A0A1W2PPZ6 126 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
LITAF-221ENST00000622633 BCL3P20749 454 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 OMGP23515 440 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 EWSR1Q01844 656 aaKnown RBP eCLIP10.5□□□□□ -0.73
LITAF-221ENST00000622633 MPV17L2Q567V2 206 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 SMIM7Q9BQ49 75 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 REPIN1Q9BWE0 567 aaKnown RBP10.5□□□□□ -0.73
LITAF-221ENST00000622633 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 WNT10AQ9GZT5 417 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 ZNF665Q9H7R5 613 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
LITAF-221ENST00000622633 MUC3AQ02505 3323 aa10.5□□□□□ -0.73
LITAF-221ENST00000622633 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 KLRC4-KLRK1H3BQV0 150 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 J3QR06 171 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 SLC33A1O00400 549 aaPredicted RBP10.49□□□□□ -0.73
LITAF-221ENST00000622633 HSPB6O14558 160 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 SCTP09683 121 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 CD1BP29016 333 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 LHX2P50458 406 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 SRYQ05066 204 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 TMEM267Q0VDI3 215 aaPredicted RBP10.49□□□□□ -0.73
LITAF-221ENST00000622633 UFSP1Q6NVU6 142 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 P2RX4Q99571 388 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
LITAF-221ENST00000622633 C1QTNF5Q9BXJ0 243 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 FGF23Q9GZV9 251 aaPredicted RBP10.49□□□□□ -0.73
LITAF-221ENST00000622633 THYN1Q9P016 225 aa10.49□□□□□ -0.73
LITAF-221ENST00000622633 F2Z2F3 143 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms