RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ACANP16112 2415 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 GOSR2O14653 212 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 TXNL1O43396 289 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 FCGR3BO75015 233 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 SIX6O95475 246 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 SERPINE2P07093 398 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 EPHA1P21709 976 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 UCP1P25874 307 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 ZNF816Q0VGE8 651 aaPredicted RBP14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 RUSC1-AS1Q66K80 236 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 LIAT1Q6ZQX7 453 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 DDB2Q92466 427 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 NABP2Q9BQ15 211 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 TEX15Q9BXT5 2789 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 IGHV1-3A0A0C4DH29 117 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 HMSDA8MTL9 139 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 RAMP3O60896 148 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 KIR2DS2P43631 304 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 SRPXP78539 464 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 SSX2Q16385 188 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 BRD3OSQ6XYD6 125 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 LGI3Q8N145 548 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 TCTEX1D1Q8N7M0 179 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 C17orf50Q8WW18 174 aa14.41□□□□□ -0.1
PTCHD3-202ENST00000622555 TLN2Q9Y4G6 2542 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 AKAP9Q99996 3911 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 A0A0B4J2A0 478 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 APOA2P02652 100 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 LPAR6P43657 344 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 BRWD1-AS2P59051 145 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 ZNF585BQ52M93 769 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 KLF17Q5JT82 389 aaPredicted RBP14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 MOB3BQ86TA1 216 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 ZNF695Q8IW36 515 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 CD300LFQ8TDQ1 290 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 SLC35D1Q9NTN3 355 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 SHPKQ9UHJ6 478 aa14.4□□□□□ -0.1
PTCHD3-202ENST00000622555 H0YJW9 148 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 RTL8BQ17RB0 113 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 TMEM268Q5VZI3 342 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 OR5AN1Q8NGI8 311 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 OR5M8Q8NGP6 311 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 LHFPL5Q8TAF8 219 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 C18orf12Q96KH6 178 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 TMEM56Q96MV1 263 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 FAM212BQ9NTI7 297 aaPredicted RBP14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 TMEM56-RWDD3S4R434 201 aa14.39□□□□□ -0.11
PTCHD3-202ENST00000622555 IGHV3-72A0A0B4J1Y9 119 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 A0A1W2PPI3 338 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 OOSP1A8MZH6 123 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 H7C2Y5 167 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 CD5LO43866 347 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 CDS2O95674 445 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 PAX6P26367 422 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 TAGLNQ01995 201 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 KRTAP1-1Q07627 177 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 CCDC144NLQ6NUI1 221 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 SELENOHQ8IZQ5 122 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 OR8H3Q8N146 312 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 DYNAPQ8N1N2 210 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 OR4S2Q8NH73 311 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 MALSU1Q96EH3 234 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 DBX1A6NMT0 343 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 RBFOX2O43251 390 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 S1PR2O95136 353 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 CRYZL1O95825 349 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 CXCL2P19875 107 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 TEX261Q6UWH6 196 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 LRTM2Q8N967 370 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 RBPMSQ93062 196 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 RBMXL1Q96E39 390 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 AJUBAQ96IF1 538 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 U3KQ87 197 aa14.38□□□□□ -0.11
PTCHD3-202ENST00000622555 ZNF469Q96JG9 3925 aaPredicted RBP14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 TIMM23O14925 209 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 MPC2O95563 127 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 HOXB5P09067 269 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 RRASP10301 218 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 RPA2P15927 270 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 S100A1P23297 94 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 MC5RP33032 325 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 SLC35G3Q8N808 338 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 NANPQ8TBE9 248 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 IL22RA2Q969J5 263 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 WASHC3Q9Y3C0 194 aa14.37□□□□□ -0.11
PTCHD3-202ENST00000622555 ADAP1O75689 374 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 HPRT1P00492 218 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 IGKV1-39P01597 117 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 IGKV1D-39P04432 117 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 RAB13P51153 203 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 DHRS7BQ6IAN0 325 aaPredicted RBP14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 LYZL2Q7Z4W2 148 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 PDPNQ86YL7 162 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 PLEKHA2Q9HB19 425 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 YAE1D1Q9NRH1 226 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 OTOGQ6ZRI0 2925 aa14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 SETXQ7Z333 2677 aaKnown RBP14.36□□□□□ -0.11
PTCHD3-202ENST00000622555 TRAV14DV4A0A0A6YYC5 116 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms