RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 HSBP1O75506 76 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 CELA3BP08861 270 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 CFHR2P36980 270 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 PAX9P55771 341 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 KISS1Q15726 138 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ZNF788Q6ZQV5 615 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 C1QL2Q7Z5L3 287 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TMEFF1Q8IYR6 380 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ZNF525Q8N782 197 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ZNF501Q96CX3 271 aaPredicted RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 RAB40CQ96S21 281 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TMEM204Q9BSN7 226 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ST20Q9HBF5 79 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 IL36BQ9NZH7 164 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 A0A0G2JMM0 328 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ZNF816-ZNF321PA0A0X1KG74 233 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 A0A1W2PPB8 328 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 KIR3DP1A8MWS1 328 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 DEGS1O15121 323 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TMPRSS2O15393 492 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 PDE6DO43924 150 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 CISD3P0C7P0 127 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 ZNF17P17021 662 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 USF1P22415 310 aaPredicted RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 GATA2P23769 480 aaPredicted RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 SRIP30626 198 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TBC1D26Q86UD7 250 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 NAT6Q93015 286 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TXNIPQ9H3M7 391 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 UBTD1Q9HAC8 227 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 C2orf72A6NCS6 295 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 F8WDY8 70 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 MT-ND6P03923 174 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 PRNPP04156 253 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 LINC00869P0C866 280 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 NPY1RP25929 384 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 NTSR1P30989 418 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 UBE2G1P62253 170 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 SRSF2Q01130 221 aaKnown RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 DLX2Q07687 328 aaPredicted RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 UFSP1Q6NVU6 142 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 C1orf210Q8IVY1 113 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 OR10G9Q8NGN4 311 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TSKUQ8WUA8 353 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 GNB1LQ9BYB4 327 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 JKAMPQ9P055 326 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 J3QR89 54 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 M0R2Z0 102 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 GFRA3O60609 400 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 TNFP01375 233 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 APOA2P02652 100 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 IAPPP10997 89 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 NPPCP23582 126 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 OR2K2Q8NGT1 345 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 ZNF721Q8TF20 911 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 RNF133Q8WVZ7 376 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 TAF15Q92804 592 aaKnown RBP eCLIP6.71□□□□□ -1.33
VPS11-209ENST00000622309 PSENENQ9NZ42 101 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 HEBP2Q9Y5Z4 205 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 MUC3AQ02505 3323 aa6.71□□□□□ -1.33
VPS11-209ENST00000622309 FREM3P0C091 2139 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 FOXI3A8MTJ6 420 aaPredicted RBP6.71□□□□□ -1.34
VPS11-209ENST00000622309 SLC17A3O00476 420 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 SLC31A1O15431 190 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 SPINK4O60575 86 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 NAPSAO96009 420 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 SRD5A2P31213 254 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 TIMP3P35625 211 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 GNB1P62873 340 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 CD300EQ496F6 205 aaPredicted RBP6.71□□□□□ -1.34
VPS11-209ENST00000622309 ZNF841Q6ZN19 808 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 ZNF114Q8NC26 417 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 OR4A5Q8NH83 315 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 APOBEC3DQ96AK3 386 aaPredicted RBP6.71□□□□□ -1.34
VPS11-209ENST00000622309 MRAP2Q96G30 205 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 OR2A5Q96R48 311 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 OR4C12Q96R67 309 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 QTRT1Q9BXR0 403 aaKnown RBP6.71□□□□□ -1.34
VPS11-209ENST00000622309 ULBP2Q9BZM5 246 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 COPS7AQ9UBW8 275 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 SPAARA0A1B0GVQ0 90 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 K7EP34 96 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 IGKV1D-33P01593 117 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 IGKV1-33P01594 117 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 CELA3AP09093 270 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 FCGR2AP12318 317 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 ARL4DP49703 201 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 GPM6AP51674 278 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 EIF3IQ13347 325 aaKnown RBP6.71□□□□□ -1.34
VPS11-209ENST00000622309 LTC4SQ16873 150 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 VN1R4Q7Z5H5 301 aa6.71□□□□□ -1.34
VPS11-209ENST00000622309 SCCPDHQ8NBX0 429 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 656.1 ms