RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 DEFB113Q30KQ7 82 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 Q8NFD4 153 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 OR10P1Q8NGE3 313 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 METTL1Q9UBP6 276 aaKnown RBP10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 IGKV1-6A0A0C4DH72 117 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 C7orf66A4D0T2 115 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 MARCH11A6NNE9 402 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 LINC00205P59089 165 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 CT45A1Q5HYN5 189 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 CT45A3Q8NHU0 189 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
SCAMP1-207ENST00000621999 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 CHST1O43916 411 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 YIF1AO95070 293 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 MPC2O95563 127 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 C1QBP02746 253 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 PAX6P26367 422 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 OR4C13Q8NGP0 309 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 ARHGAP32A7KAX9 2087 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 A0A0D9SG52 128 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 OPCMLQ14982 345 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 CLEC9AQ6UXN8 241 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 FAM24AA6NFZ4 105 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 SYNGR2O43760 224 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 MMP23AO75900 390 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 FGF2P09038 288 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 AKR1C8PQ5T2L2 129 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 MMP26Q9NRE1 261 aa10.29□□□□□ -0.76
SCAMP1-207ENST00000621999 TRBV6-6A0A0A6YYG2 114 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 IGKV1D-33P01593 117 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 IGKV1-33P01594 117 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 MSMBP08118 114 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 METTL15P1P0C7V9 234 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM267Q0VDI3 215 aaPredicted RBP10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 CITED4Q96RK1 184 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 CABLES2Q9BTV7 478 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 CHD3Q12873 2000 aaKnown RBP10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 S100A11P31949 105 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 C11orf87Q6NUJ2 197 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 MISP3Q96FF7 219 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 FBP1P09467 338 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 OR13C7P0DN81 318 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 SELENOHQ8IZQ5 122 aaKnown RBP10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 GPR146Q96CH1 333 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 ACY3Q96HD9 319 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 GNB4Q9HAV0 340 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 NAV3Q8IVL0 2385 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 A0A1W2PPR1 153 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 C22orf46C9J442 243 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 CD37P11049 281 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 TPT1P13693 172 aaKnown RBP10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 TMEM187Q14656 261 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 REG4Q9BYZ8 158 aa10.28□□□□□ -0.76
SCAMP1-207ENST00000621999 CDS2O95674 445 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 CXorf66Q5JRM2 361 aaPredicted RBP10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 ACOT7LQ6ZUV0 252 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 OR52M1Q8NGK5 317 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 DTD1Q8TEA8 209 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 OR10C1Q96KK4 312 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 KAAG1Q9UBP8 84 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 PFDN2Q9UHV9 154 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 PRNDQ9UKY0 176 aa10.27□□□□□ -0.76
SCAMP1-207ENST00000621999 CAMLGP49069 296 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 AKIRIN2Q53H80 203 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 NANPQ8TBE9 248 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 SLC35E1Q96K37 410 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 ARPC5LQ9BPX5 153 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 SRSF7Q16629 238 aaKnown RBP eCLIP10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 PLEKHA2Q9HB19 425 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 FBXO7Q9Y3I1 522 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 OR51B2Q9Y5P1 312 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 HELZ2Q9BYK8 2649 aaKnown RBP10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 MYO9AB2RTY4 2548 aa10.27□□□□□ -0.77
SCAMP1-207ENST00000621999 A0A1B0GU03 582 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 RAMP3O60896 148 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 CRIP3Q6Q6R5 217 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR10A7Q8NGE5 316 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 MMP24Q9Y5R2 645 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 TIMM23O14925 209 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 KCNAB3O43448 404 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 RPL8P62917 257 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 TMUB2Q71RG4 321 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OR1L8Q8NGR8 309 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 PARP11Q9NR21 331 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 JMJD1CQ15652 2540 aa10.26□□□□□ -0.77
SCAMP1-207ENST00000621999 OPRK1P41145 380 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms