RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 BAP18Q8IXM2 172 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 ZNF596Q8TC21 504 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 ONECUT1Q9UBC0 465 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 ZNF462Q96JM2 2506 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 hCG_1809904A0A1W2PP81 198 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 A0A1W2PPE2 198 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 A0A1W2PR64 198 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 A0A1W2PRV1 198 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 RBP4P02753 201 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 CT45A6P0DMU7 189 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 CT45A5P0DMU8 189 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 CT45A7P0DMV0 189 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 TMEM252Q8N6L7 170 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 CCL19Q99731 98 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 SLC35D1Q9NTN3 355 aa17.52■□□□□ 0.39
SPAST-204ENST00000621856 C22orf46C9J442 243 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 MED6O75586 246 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 PAX9P55771 341 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 TNFRSF9Q07011 255 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 RTL8BQ17RB0 113 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 LY6G5BQ8NDX9 201 aa17.51■□□□□ 0.39
SPAST-204ENST00000621856 MRPL20Q9BYC9 149 aaKnown RBP17.51■□□□□ 0.39
SPAST-204ENST00000621856 LOC105371242A0A075B767 164 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 IL3RAP26951 378 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 FAM74A1Q5RGS3 127 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 ZNF525Q8N782 197 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 TMEM186Q96B77 213 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 RBKSQ9H477 322 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 PSENENQ9NZ42 101 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 HSPB7Q9UBY9 170 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 H3BP45 60 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 JTBO76095 146 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 APOA2P02652 100 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 GAPDHP04406 335 aaKnown RBP17.5■□□□□ 0.39
SPAST-204ENST00000621856 OR9G9P0C7N8 305 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 UBE2KP61086 200 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 SRSF1Q07955 248 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPAST-204ENST00000621856 FAM71F2Q6NXP2 309 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 VKORC1L1Q8N0U8 176 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 WSB1Q9Y6I7 421 aa17.5■□□□□ 0.39
SPAST-204ENST00000621856 BORCS7-ASMTA0A0B4J1R7 106 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 IGHV2-26A0A0B4J1V2 119 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 FAM90A9PA6NNJ1 464 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 REG1BP48304 166 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 PRRX1P54821 245 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 DHRS7BQ6IAN0 325 aaPredicted RBP17.49■□□□□ 0.39
SPAST-204ENST00000621856 ZNF295-AS1Q8N0V1 137 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 OR4A16Q8NH70 328 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 SMIM8Q96KF7 97 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 WFDC1Q9HC57 220 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 TMEM140Q9NV12 185 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 DCHS2Q6V1P9 2916 aa17.49■□□□□ 0.39
SPAST-204ENST00000621856 CST7O76096 145 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 HRASP01112 189 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 IGHV4-39P01824 125 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 DLX1P56177 255 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 OR2B8PP59922 312 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 BAXQ07812 192 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 TNFRSF14Q92956 283 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 CLEC7AQ9BXN2 247 aa17.48■□□□□ 0.39
SPAST-204ENST00000621856 USP9XQ93008 2570 aaPredicted RBP17.48■□□□□ 0.39
SPAST-204ENST00000621856 LINC00862A6NCI5 91 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 H7C2Y5 167 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 TXNL1O43396 289 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 RRASP10301 218 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 COX6B1P14854 86 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 COX7A1P24310 79 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 PDLIM4P50479 330 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 ARHGDIBP52566 201 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 TAS2R30P59541 319 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 PRB3Q04118 309 aaPredicted RBP17.47■□□□□ 0.39
SPAST-204ENST00000621856 TMEM267Q0VDI3 215 aaPredicted RBP17.47■□□□□ 0.39
SPAST-204ENST00000621856 STX12Q86Y82 276 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 OR13D1Q8NGV5 346 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 TMED6Q8WW62 240 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 IGFBPL1Q8WX77 278 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 QTRT1Q9BXR0 403 aaKnown RBP17.47■□□□□ 0.39
SPAST-204ENST00000621856 SLC25A32Q9H2D1 315 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 FLNCQ14315 2725 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 NMBP08949 121 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 ZNF137PP52743 207 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 TAGLNQ01995 201 aaKnown RBP17.47■□□□□ 0.39
SPAST-204ENST00000621856 CLINT1Q14677 625 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 PDZD9Q8IXQ8 264 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 ST6GALNAC6Q969X2 333 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 RHOVQ96L33 236 aa17.47■□□□□ 0.39
SPAST-204ENST00000621856 MYO18BQ8IUG5 2567 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 A1L4Q6 167 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 CEBPZOSA8MTT3 80 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 IGHV2-5P01817 119 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 DYNLT3P51808 116 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 ARF6P62330 175 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 DIAPH2-AS1Q14236 149 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 EIF5AL1Q6IS14 154 aaKnown RBP17.46■□□□□ 0.39
SPAST-204ENST00000621856 TGIF2LXQ8IUE1 241 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 TMEM217Q8N7C4 229 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 UBAC2Q8NBM4 344 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 NABP2Q9BQ15 211 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 BPESC1Q9GZL8 116 aa17.46■□□□□ 0.39
SPAST-204ENST00000621856 SPTAN1Q13813 2472 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms