RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 DHRS7BQ6IAN0 325 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 OR5AN1Q8NGI8 311 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 R3HDM4Q96D70 268 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 RBMXL1Q96E39 390 aaKnown RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 SPIN2AQ99865 258 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 SPIN2BQ9BPZ2 258 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 NMES1Q9C002 83 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 RANBP3Q9H6Z4 567 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 TBL2Q9Y4P3 447 aaKnown RBP8.62□□□□□ -1.03
CPNE3-212ENST00000621783 AUP1Q9Y679 476 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 MINOS1-NBL1R4GNA1 71 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 ARID1AO14497 2285 aa8.62□□□□□ -1.03
CPNE3-212ENST00000621783 TRAV14DV4A0A0A6YYC5 116 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 H7C2Y5 167 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 NPFFO15130 113 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 ATG12O94817 140 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 KRASP01116 189 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 C1QBP02746 253 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 IGKV1-16P04430 117 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 P0C879 139 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 RRASP10301 218 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 SAA4P35542 130 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 GZMKP49863 264 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 RAB13P51153 203 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 CYCSP99999 105 aaKnown RBP8.61□□□□□ -1.03
CPNE3-212ENST00000621783 TAGLNQ01995 201 aaKnown RBP8.61□□□□□ -1.03
CPNE3-212ENST00000621783 IZUMO4Q1ZYL8 232 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 LRRC37A5PQ49AS3 106 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 Q5BKY6 102 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
CPNE3-212ENST00000621783 PDPNQ86YL7 162 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 FAM219AQ8IW50 185 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 PPP1R1CQ8WVI7 109 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 RRNAD1Q96FB5 475 aaKnown RBP8.61□□□□□ -1.03
CPNE3-212ENST00000621783 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 GSKIPQ9P0R6 139 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 WASHC3Q9Y3C0 194 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 HILPDAQ9Y5L2 63 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 CRYBG3Q68DQ2 2970 aa8.61□□□□□ -1.03
CPNE3-212ENST00000621783 GCN1Q92616 2671 aaKnown RBP8.6□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 MARCH11A6NNE9 402 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 OOSP1A8MZH6 123 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 J3QLI3 93 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 TIMM23O14925 209 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 SCGB1D2O95969 90 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 TGFAP01135 160 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 SLC25A6P12236 298 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 NQO2P16083 231 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 EIF2B2P49770 351 aaKnown RBP8.6□□□□□ -1.03
CPNE3-212ENST00000621783 LGALS4P56470 323 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 ERVK-16P61578 105 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 IL15RAQ13261 267 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 MIDNQ504T8 468 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 RUSC1-AS1Q66K80 236 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 NOXA1Q86UR1 476 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 VKORC1L1Q8N0U8 176 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 DYNAPQ8N1N2 210 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 CIARTQ8N365 385 aaPredicted RBP8.6□□□□□ -1.03
CPNE3-212ENST00000621783 DMBX1Q8NFW5 382 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 OR4D5Q8NGN0 318 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 C17orf50Q8WW18 174 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 CFHR4Q92496 578 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 PTPN13Q12923 2485 aa8.6□□□□□ -1.03
CPNE3-212ENST00000621783 ANKRD17O75179 2603 aaKnown RBP8.59□□□□□ -1.03
CPNE3-212ENST00000621783 A0A1B0GU03 582 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 SHOXO15266 292 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 PITX3O75364 302 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 NXPH3O95157 252 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 HRASP01112 189 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 AVPP01185 164 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 IGHV4-38-2P0DP08 117 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 PAX6P26367 422 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 MC5RP33032 325 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 NKX2-5P52952 324 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-212ENST00000621783 S100A10P60903 97 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 FGL1Q08830 312 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 RAB32Q13637 225 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 SSX2Q16385 188 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 Q6ZRM9 215 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 OR11H4Q8NGC9 324 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 OR1S1Q8NH92 325 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms