RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GSTT2P0CG29 244 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 GSTT2BP0CG30 244 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 MC5RP33032 325 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 INSL3P51460 131 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
CPNE3-210ENST00000621245 MLLT11Q13015 90 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-210ENST00000621245 AKIRIN2Q53H80 203 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF562Q6V9R5 426 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 Q8N1Y9 231 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 OR5T1Q8NG75 326 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 URM1Q9BTM9 101 aaKnown RBP8.76□□□□□ -1.01
CPNE3-210ENST00000621245 OR2D2Q9H210 308 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 SDHAF2Q9NX18 166 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 SCN3BQ9NY72 215 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 SMIM30A4D0T7 59 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 BET1O15155 118 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 DENRO43583 198 aaKnown RBP8.75□□□□□ -1.01
CPNE3-210ENST00000621245 RGS10O43665 173 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 RBBP9O75884 186 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 SPDEFO95238 335 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 HSPB1P04792 205 aaKnown RBP8.75□□□□□ -1.01
CPNE3-210ENST00000621245 TFAP2AP05549 437 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 OR8U9P0C7N5 309 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 GNB3P16520 340 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 CRHBPP24387 322 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 FXYD3Q14802 87 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 IL34Q6ZMJ4 242 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 NR2C2APQ86WQ0 139 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 TCTEX1D1Q8N7M0 179 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 POC5Q8NA72 575 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 CLRN3Q8NCR9 226 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 MGLLQ99685 303 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 CABLES2Q9BTV7 478 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 CCDC90BQ9GZT6 254 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 RIMS4Q9H426 269 aaPredicted RBP8.75□□□□□ -1.01
CPNE3-210ENST00000621245 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
CPNE3-210ENST00000621245 A0A075B6Q4 140 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 MFNGO00587 321 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 FABP7O15540 132 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 APOA2P02652 100 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
CPNE3-210ENST00000621245 PITPNAQ00169 270 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 DYRK1AQ13627 763 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 OR56B1Q8NGI3 324 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 TSNAXQ99598 290 aaKnown RBP8.74□□□□□ -1.01
CPNE3-210ENST00000621245 VCXQ9H320 206 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF221Q9UK13 617 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 V9GY05 133 aa8.74□□□□□ -1.01
CPNE3-210ENST00000621245 TRBV6-7A0A0A0MS04 114 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 LINC00473A8K010 186 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 RAB27BO00194 218 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 ARL6IP5O75915 188 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 IGLV1-51P01701 117 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 EDN2P20800 178 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 TMEM267Q0VDI3 215 aaPredicted RBP8.73□□□□□ -1.01
CPNE3-210ENST00000621245 CASC10Q5T4H9 136 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 PYHIN1Q6K0P9 492 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 IDO2Q6ZQW0 420 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 PRSS48Q7RTY5 328 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 OR4A4PQ8NGN8 299 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 OR6Q1Q8NGQ2 317 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 FLYWCH2Q96CP2 140 aaKnown RBP8.73□□□□□ -1.01
CPNE3-210ENST00000621245 RAB3CQ96E17 227 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 HARBI1Q96MB7 349 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 RNF5Q99942 180 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF355PQ9NSJ1 428 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 TPRKBQ9Y3C4 175 aa8.73□□□□□ -1.01
CPNE3-210ENST00000621245 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 J3QRK9 145 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF561-AS1K7EIQ3 104 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 PRH1P02810 166 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 IGHV4-30-4P0DP06 118 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 HIST1H1DP16402 221 aaKnown RBP8.72□□□□□ -1.01
CPNE3-210ENST00000621245 TRAM1Q15629 374 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 C10orf55Q5SWW7 151 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.72□□□□□ -1.01
CPNE3-210ENST00000621245 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 DDB2Q92466 427 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 THAP7Q9BT49 309 aaPredicted RBP8.72□□□□□ -1.01
CPNE3-210ENST00000621245 GHITMQ9H3K2 345 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 SLA2Q9H6Q3 261 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 MGAT4AQ9UM21 535 aa8.72□□□□□ -1.01
CPNE3-210ENST00000621245 IFITM5A6NNB3 132 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 CNIH1O95406 144 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 PSMA1P25786 263 aaKnown RBP8.71□□□□□ -1.02
CPNE3-210ENST00000621245 SYNJ2BPP57105 145 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 ZNF45Q02386 682 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 KLF5Q13887 457 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-210ENST00000621245 TBCEQ15813 527 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-210ENST00000621245 ZFAND6Q6FIF0 208 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 IZUMO2Q6UXV1 221 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 H1FOOQ8IZA3 346 aaPredicted RBP8.71□□□□□ -1.02
CPNE3-210ENST00000621245 CNBD2Q96M20 576 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 OR4C12Q96R67 309 aa8.71□□□□□ -1.02
CPNE3-210ENST00000621245 TINAGL1Q9GZM7 467 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms