RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SPAARA0A1B0GVQ0 90 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 LGALS7P47929 136 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 SRSF7Q16629 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDH1-214ENST00000621016 C6orf15Q6UXA7 325 aaPredicted RBP9.08□□□□□ -0.96
CDH1-214ENST00000621016 NRN1Q9NPD7 142 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 MANBALQ9NQG1 85 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 THYN1Q9P016 225 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 B4DEV8 164 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 H7BYZ3 331 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 HYPMO75409 117 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 TMEM50AO95807 157 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 GRPP07492 148 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 LYL1P12980 280 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 P2RY1P47900 373 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 STPG3Q8N7X2 389 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 FGF23Q9GZV9 251 aaPredicted RBP9.07□□□□□ -0.96
CDH1-214ENST00000621016 ARRDC1-AS1Q9H2J1 176 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 SPTA1P02549 2419 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 MED12LQ86YW9 2145 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 F2Z2F3 143 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 RBMXL2O75526 392 aaKnown RBP9.07□□□□□ -0.96
CDH1-214ENST00000621016 TUSC2O75896 110 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 SYNGR4O95473 234 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 CEBPDP49716 269 aaPredicted RBP9.07□□□□□ -0.96
CDH1-214ENST00000621016 RELBQ01201 579 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 TESK1Q15569 626 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 LTC4SQ16873 150 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 PRR31Q5SQ13 230 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
CDH1-214ENST00000621016 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 OR1A1Q9P1Q5 309 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 PRSS50Q9UI38 385 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 FZR1Q9UM11 496 aa9.07□□□□□ -0.96
CDH1-214ENST00000621016 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 IGHV3-13P01766 116 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 IGHV3-7P01780 117 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 BMP5P22003 454 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 PLP2Q04941 152 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 ZDHHC23Q8IYP9 409 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 PARLQ9H300 379 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 ZNF665Q9H7R5 613 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 WIPI2Q9Y4P8 454 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 NCKAP5O14513 1909 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 SLC22A20A6NK97 555 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 CNIH1O95406 144 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 MT-CO2P00403 227 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 OPN1MWP04001 364 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 OPN1MW2P0DN77 364 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 OPN1MW3P0DN78 364 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 PSG2P11465 335 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 OR1C1Q15619 314 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 SPINK9Q5DT21 86 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 RSG1Q9BU20 258 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 TMEM222Q9H0R3 208 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 SMG1Q96Q15 3661 aaKnown RBP9.06□□□□□ -0.96
CDH1-214ENST00000621016 TRAV30A0A087WSZ9 112 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 CD300LBA8K4G0 201 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 AZU1P20160 251 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 ECI1P42126 302 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 ZFP36L1Q07352 338 aaKnown RBP9.06□□□□□ -0.96
CDH1-214ENST00000621016 CEACAM21Q3KPI0 293 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 PRSS57Q6UWY2 283 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 H1FOOQ8IZA3 346 aaPredicted RBP9.06□□□□□ -0.96
CDH1-214ENST00000621016 KCNE4Q8WWG9 221 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 RBMXL1Q96E39 390 aaKnown RBP9.06□□□□□ -0.96
CDH1-214ENST00000621016 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
CDH1-214ENST00000621016 A0A0G2JRQ6 117 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 A0A1B0GV72 72 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 MMP23AO75900 390 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TOMM40O96008 361 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 PMCHP20382 165 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TMEM144Q7Z5S9 345 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 ZNF808Q8N4W9 903 aaPredicted RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 ZNF48Q96MX3 618 aaPredicted RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 ABI3Q9P2A4 366 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 BOKQ9UMX3 212 aaPredicted RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 WASHC3Q9Y3C0 194 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 PKDREJQ9NTG1 2253 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 IGKV1-6A0A0C4DH72 117 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 CER1O95813 267 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 GAPDHP04406 335 aaKnown RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 WDR5BQ86VZ2 330 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 BAGE3Q86Y29 109 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 BAGE2Q86Y30 109 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TPRX1Q8N7U7 411 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 GPR146Q96CH1 333 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TRAPPC2LQ9UL33 140 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
CDH1-214ENST00000621016 ADGRG4Q8IZF6 3080 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 ANKRD30BLA7E2S9 258 aa9.05□□□□□ -0.96
CDH1-214ENST00000621016 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms