RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 PKDREJQ9NTG1 2253 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 ZFHX2Q9C0A1 2572 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 PAGE4O60829 102 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SRP19P09132 144 aaKnown RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 RAB4AP20338 218 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 GLRXP35754 106 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 PLGLAQ15195 96 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 COL5A1P20908 1838 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 C16orf97H3BN30 126 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 IGHG3P01860 377 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 FOXC1Q12948 553 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 LRFN3Q9BTN0 628 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 CALYQ9NYX4 217 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SOX15O60248 233 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 IGKV1-5P01602 117 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SPCS3P61009 180 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 ERHP84090 104 aaKnown RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 Q6ZRM9 215 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SSMEM1Q8WWF3 244 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 LEAP2Q969E1 77 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 ZDHHC16Q969W1 377 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 CCL13Q99616 98 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 GAL3ST2Q9H3Q3 398 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 PATZ1Q9HBE1 687 aaKnown RBP7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SLC35D1Q9NTN3 355 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 SERTAD4Q9NUC0 356 aa7.74□□□□□ -1.17
RBFOX1-223ENST00000620507 NDUFB3O43676 98 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 OR7C2O60412 319 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 KRTCAP3Q53RY4 240 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 SLC35E1Q96K37 410 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 TMPRSS5Q9H3S3 457 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 PLSCR4Q9NRQ2 329 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 ZDHHC8Q9ULC8 765 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 CPAMD8Q8IZJ3 1885 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 TRAV38-1A0A0B4J264 116 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 TRGV8A0A0C4DH27 118 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 IGHV1-18A0A0C4DH31 117 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 LOC102723971A0A1B0GUV8 181 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 TMEM50AO95807 157 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 MYPOPQ86VE0 399 aaPredicted RBP7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 VKORC1L1Q8N0U8 176 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 CLDND2Q8NHS1 167 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 RAB24Q969Q5 203 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 P2RX4Q99571 388 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 CISD1Q9NZ45 108 aaKnown RBP7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 MLNRO43193 412 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 IL3RAP26951 378 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 GALR1P47211 349 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 THBS3P49746 956 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 HTD2P86397 168 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 TUBA4BQ9H853 241 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 SAP30LQ9HAJ7 183 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 DOCK11Q5JSL3 2073 aa7.73□□□□□ -1.17
RBFOX1-223ENST00000620507 COLCA2A8K830 154 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 NPIPB11E5RHQ5 1161 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 F6UZH7 168 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 GYPAP02724 150 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 NPY1RP25929 384 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 SUB1P53999 127 aaKnown RBP eCLIP7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 FAM27E3Q08E93 113 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 FAM201AQ5SY85 155 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 WDR86Q86TI4 376 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 RBMXL3Q8N7X1 1067 aaKnown RBP7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 XIRP2A4UGR9 3374 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 IGKV3-15P01624 115 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 CHRNA7P36544 502 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 ICAM4Q14773 271 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 RPL39P5Q59GN2 51 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 ZNF880Q6PDB4 577 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 OR51M1Q9H341 326 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 MBNL3Q9NUK0 354 aaKnown RBP7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 SSUH2Q9Y2M2 353 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 PRR14LQ5THK1 2151 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 CYB5R3P00387 301 aaPredicted RBP7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 CD55P08174 381 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 SELLP14151 372 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 TAS2R45P59539 299 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 RHOBP62745 196 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 ZNF343Q6P1L6 599 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 GCSAMQ8N6F7 178 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 STARD4Q96DR4 205 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 SFXN3Q9BWM7 321 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 QTRT1Q9BXR0 403 aaKnown RBP7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 TMEM140Q9NV12 185 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
RBFOX1-223ENST00000620507 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.17
RBFOX1-223ENST00000620507 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.17
RBFOX1-223ENST00000620507 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.17
RBFOX1-223ENST00000620507 ACY3Q96HD9 319 aa7.71□□□□□ -1.17
RBFOX1-223ENST00000620507 RPH3ALQ9UNE2 315 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms