RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MGAQ8IWI9 3026 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 IGKV1D-13A0A0B4J2D9 117 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 hCG_38984A0A1B0GV85 526 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 IGKV1-13P0DP09 117 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 RPL29P47914 159 aaKnown RBP5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 HIST1H3AP68431 136 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 CATR1Q13166 79 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 RNPS1Q15287 305 aaKnown RBP5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 IZUMO4Q1ZYL8 232 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 FFAR4Q5NUL3 377 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 IGFL2Q6UWQ7 119 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 CALHM1Q8IU99 346 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 MS4A10Q96PG2 267 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 GPR35Q9HC97 309 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 PLSCR4Q9NRQ2 329 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 SLC45A2Q9UMX9 530 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 GYPAP02724 150 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 CRYGSP22914 178 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 ANKRD39Q53RE8 183 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM78BQ5VT40 261 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF573Q86YE8 665 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 OR1K1Q8NGR3 316 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 TAF15Q92804 592 aaKnown RBP eCLIP5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 YPEL4Q96NS1 127 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 OR51B6Q9H340 312 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 ASPMQ8IZT6 3477 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 PTPRQQ9UMZ3 2332 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 K7EM74 188 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 CEACAM4O75871 244 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 WISP2O76076 250 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM87AP0C7U9 286 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 RAB4AP20338 218 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 CNN1P51911 297 aaKnown RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 MBD3L1Q8WWY6 194 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SDSLQ96GA7 329 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 OR4C12Q96R67 309 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 CPAMD8Q8IZJ3 1885 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM50AO95807 157 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SNRPCP09234 159 aaKnown RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 GZMBP10144 247 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 APLNRP35414 380 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 LRRC75BQ2VPJ9 315 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 ASCL4Q6XD76 172 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 NUFIP2Q7Z417 695 aaKnown RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 TAAR6Q96RI8 345 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM147Q9BVK8 224 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 PARLQ9H300 379 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 RAXQ9Y2V3 346 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SMPD2O60906 423 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SFTPCP11686 197 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SLC25A6P12236 298 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF25P17030 456 aaPredicted RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 KITLGP21583 273 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SRP14P37108 136 aaKnown RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 ATP6V1FQ16864 119 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 RSPO1Q2MKA7 263 aaPredicted RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SHISA2Q6UWI4 295 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 TOMM20LQ6UXN7 152 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF525Q8N782 197 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 SPSB4Q96A44 273 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 APOBEC3DQ96AK3 386 aaPredicted RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 WDR61Q9GZS3 305 aaKnown RBP5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 WNT5BQ9H1J7 359 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 VSIRQ9H7M9 311 aa5.91□□□□□ -1.46
SRGAP3-213ENST00000618999 NCKAP5O14513 1909 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 A8MXE2 369 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 PAGE4O60829 102 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 KRASP01116 189 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10J1P30954 320 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 P2RY6Q15077 328 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 RIPPLY2Q5TAB7 128 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 FOXL2NBQ6ZUU3 175 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 MOB1BQ7L9L4 216 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 BAGE3Q86Y29 109 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 BAGE2Q86Y30 109 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM58AQ8N1B3 248 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF664Q8N3J9 261 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 BEND2Q8NDZ0 799 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 UBALD1Q8TB05 177 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM170AQ8WVE7 144 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 LSM10Q969L4 123 aaKnown RBP5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 CIB3Q96Q77 187 aaPredicted RBP5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 CBLN4Q9NTU7 201 aa5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 ANKRD11Q6UB99 2663 aaPredicted RBP5.9□□□□□ -1.46
SRGAP3-213ENST00000618999 FREM1Q5H8C1 2179 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 IGKV3D-15A0A087WSY6 115 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 A8MWP6 167 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 C11orf94C9JXX5 98 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 F6UZH7 168 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 M0QZK8 103 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 SIRPB1O00241 398 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 GGCTO75223 188 aaKnown RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 CRYABP02511 175 aaKnown RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 EDN2P20800 178 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 TPPP2P59282 170 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 UBE2G2P60604 165 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 RPL23P62829 140 aaKnown RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 PDLIM3Q53GG5 364 aaPredicted RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms