RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
MATR3-227ENST00000618441 FAM206AQ9NX38 181 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 NLRC5Q86WI3 1866 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 CA2P00918 260 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 ARL4DP49703 201 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 SRPXP78539 464 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 RBPJQ06330 500 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 MUC15Q8N387 334 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 SPSB4Q96A44 273 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 OR2A5Q96R48 311 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 C1orf43Q9BWL3 253 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 CD207Q9UJ71 328 aa10.47□□□□□ -0.73
MATR3-227ENST00000618441 TRAV38-1A0A0B4J264 116 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 IGKV1-9A0A0C4DH69 117 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 IGKV1D-33P01593 117 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 IGKV1-33P01594 117 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 ANOS1P23352 680 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 APOBEC3DQ96AK3 386 aaPredicted RBP10.46□□□□□ -0.73
MATR3-227ENST00000618441 POM121L2Q96KW2 1035 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 ISG15P05161 165 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 CFPP27918 469 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 SRSF2Q01130 221 aaKnown RBP10.46□□□□□ -0.73
MATR3-227ENST00000618441 RUNX3Q13761 415 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 ZNF141Q15928 474 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 ASPHD1Q5U4P2 390 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 MRPL21Q7Z2W9 205 aaKnown RBP10.46□□□□□ -0.73
MATR3-227ENST00000618441 TMEM222Q9H0R3 208 aa10.46□□□□□ -0.73
MATR3-227ENST00000618441 C7orf71A4D174 169 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 H0Y980 276 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 ESDP10768 282 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 LINC00310P59036 64 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 FAM222BQ8WU58 562 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 SIGLEC12Q96PQ1 595 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 SERGEFQ9UGK8 458 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 MRPS16Q9Y3D3 137 aaKnown RBP10.46□□□□□ -0.74
MATR3-227ENST00000618441 CELSR3Q9NYQ7 3312 aa10.46□□□□□ -0.74
MATR3-227ENST00000618441 FRYLO94915 3013 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 IGHV2-26A0A0B4J1V2 119 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 A0A1W2PS18 150 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 SLC22A20A6NK97 555 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 VDAC1P21796 283 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 ZNF658BQ4V348 819 aaPredicted RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 GMPPAQ96IJ6 420 aaPredicted RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 OR8B2Q96RD0 313 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 ZNF324O75467 553 aaPredicted RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 SLC35E2P0CK97 266 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 OOSP2Q86WS3 158 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 PATE1Q8WXA2 126 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 PEF1Q9UBV8 284 aaKnown RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 TSSC4Q9Y5U2 329 aaPredicted RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 PCNX3Q9H6A9 2034 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 BMPR1BO00238 502 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 TYMSP04818 313 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 FOXL2P58012 376 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 MALLQ13021 153 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 SGCBQ16585 318 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
MATR3-227ENST00000618441 C1orf147Q96MC9 270 aaPredicted RBP10.45□□□□□ -0.74
MATR3-227ENST00000618441 ERGP11308 486 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CAMPP49913 170 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 TFF2Q03403 129 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 NSDHLQ15738 373 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CEACAM21Q3KPI0 293 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 GCSAMLQ5JQS6 135 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 SSX8Q7RTT4 187 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 ZNF721Q8TF20 911 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
MATR3-227ENST00000618441 FAM131CQ96AQ9 280 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 MMABQ96EY8 250 aaPredicted RBP10.44□□□□□ -0.74
MATR3-227ENST00000618441 SIGMAR1Q99720 223 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 SYNGR2O43760 224 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 EML2O95834 649 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 SLC25A6P12236 298 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 NPY1RP25929 384 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CTRLP40313 264 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 ZNF324BQ6AW86 544 aaPredicted RBP10.44□□□□□ -0.74
MATR3-227ENST00000618441 ACSM6Q6P461 480 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 MBD3L1Q8WWY6 194 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 BORCS8Q96FH0 119 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 VSTM2LQ96N03 204 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 AKIRIN1Q9H9L7 192 aaPredicted RBP10.44□□□□□ -0.74
MATR3-227ENST00000618441 H0Y8X5 98 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 EFEMP2O95967 443 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CELA3BP08861 270 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 WNT2P09544 360 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CD38P28907 300 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 GNB1P62873 340 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 ZNF766Q5HY98 468 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
MATR3-227ENST00000618441 CA13Q8N1Q1 262 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms