RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ZNF562Q6V9R5 426 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 ZNF695Q8IW36 515 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 BVESQ8NE79 360 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 KLHL30-AS1Q8NEE0 82 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 HARBI1Q96MB7 349 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 NECAP2Q9NVZ3 263 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 WSB1Q9Y6I7 421 aa19.48■□□□□ 0.71
PMS1-220ENST00000618056 PRKDCP78527 4128 aaKnown RBP19.47■□□□□ 0.71
PMS1-220ENST00000618056 DNAH3Q8TD57 4116 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 J3QRK9 145 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 SLC25A17O43808 307 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 IGLV2-14P01704 120 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 CDX1P47902 265 aaPredicted RBP19.47■□□□□ 0.71
PMS1-220ENST00000618056 C19orf54Q5BKX5 351 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 ETV3LQ6ZN32 361 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 C18orf65Q6ZTR6 163 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 C1QL4Q86Z23 238 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 MFSD4AQ8N468 514 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 MINDY2Q8NBR6 621 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 OR5AP2Q8NGF4 316 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 MYOZ3Q8TDC0 251 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 ANAPC10Q9UM13 185 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 RBMX2Q9Y388 322 aaKnown RBP19.47■□□□□ 0.71
PMS1-220ENST00000618056 FBXO7Q9Y3I1 522 aa19.47■□□□□ 0.71
PMS1-220ENST00000618056 NUDT19A8MXV4 375 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 IGLV1-40P01703 118 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 CD33P20138 364 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 KPRPQ5T749 579 aaPredicted RBP19.46■□□□□ 0.71
PMS1-220ENST00000618056 LCNL1Q6ZST4 164 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 C8orf86Q6ZUL3 223 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 PPP1R27Q86WC6 154 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 NUBP2Q9Y5Y2 271 aa19.46■□□□□ 0.71
PMS1-220ENST00000618056 CRYGBP07316 175 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 EGR2P11161 476 aaPredicted RBP19.45■□□□□ 0.7
PMS1-220ENST00000618056 FCGR2CP31995 323 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 BEAN1Q3B7T3 259 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 TCTEX1D1Q8N7M0 179 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 AP3S1Q92572 193 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 IFT46Q9NQC8 304 aa19.45■□□□□ 0.7
PMS1-220ENST00000618056 MEIS3P1A6NDR6 274 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 SHOXO15266 292 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 CA2P00918 260 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 MSMO1Q15800 293 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 OVCH2Q7RTZ1 564 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 LINC00482Q8N8I6 264 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 CLCC1Q96S66 551 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 HSD17B10Q99714 261 aaKnown RBP19.44■□□□□ 0.7
PMS1-220ENST00000618056 TPSG1Q9NRR2 321 aa19.44■□□□□ 0.7
PMS1-220ENST00000618056 SRRM4A7MD48 611 aaKnown RBP19.43■□□□□ 0.7
PMS1-220ENST00000618056 WIPF1O43516 503 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 NAT1P18440 290 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 AADACP22760 399 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 PRSS3P35030 304 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 MYCNOSP40205 109 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 TMEM267Q0VDI3 215 aaPredicted RBP19.43■□□□□ 0.7
PMS1-220ENST00000618056 EIF4EBP1Q13541 118 aaPredicted RBP19.43■□□□□ 0.7
PMS1-220ENST00000618056 CDK10Q15131 360 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 ECSCRQ19T08 205 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 OSR1Q8TAX0 266 aaPredicted RBP19.43■□□□□ 0.7
PMS1-220ENST00000618056 PRELID3BQ9Y3B1 194 aa19.43■□□□□ 0.7
PMS1-220ENST00000618056 CRYZL1O95825 349 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 PPYP01298 95 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 FCER2P06734 321 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 AKIRIN2Q53H80 203 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 OXLD1Q5BKU9 147 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 MZT2AQ6P582 158 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 TMEM65Q6PI78 240 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 KCTD9Q7L273 389 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 MRPL41Q8IXM3 137 aaKnown RBP19.42■□□□□ 0.7
PMS1-220ENST00000618056 GIMAP1Q8WWP7 306 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 P2RX4Q99571 388 aa19.42■□□□□ 0.7
PMS1-220ENST00000618056 FOXA2Q9Y261 457 aaPredicted RBP19.42■□□□□ 0.7
PMS1-220ENST00000618056 HPGDSO60760 199 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 ELK1P19419 428 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 RPL30P62888 115 aaKnown RBP19.41■□□□□ 0.7
PMS1-220ENST00000618056 KIAA0141Q14154 515 aaPredicted RBP19.41■□□□□ 0.7
PMS1-220ENST00000618056 ABHD5Q8WTS1 349 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 RCC1LQ96I51 464 aaKnown RBP19.41■□□□□ 0.7
PMS1-220ENST00000618056 UBE2E2Q96LR5 201 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 KLK15Q9H2R5 256 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 UBE2KP61086 200 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 SSBP2P81877 361 aaPredicted RBP19.41■□□□□ 0.7
PMS1-220ENST00000618056 ZNF66Q6ZN08 573 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 TEX45Q8NA69 505 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 GPX8Q8TED1 209 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 SECTM1Q8WVN6 248 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 C4orf3Q8WVX3 66 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 ARPC1AQ92747 370 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 RAX2Q96IS3 184 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 SCPEP1Q9HB40 452 aa19.41■□□□□ 0.7
PMS1-220ENST00000618056 MRPS7Q9Y2R9 242 aaKnown RBP19.41■□□□□ 0.7
PMS1-220ENST00000618056 ARPC1BO15143 372 aaKnown RBP19.4■□□□□ 0.7
PMS1-220ENST00000618056 SOX15O60248 233 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 FCGR3BO75015 233 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 TGP01266 2768 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 RAB9AP51151 201 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 TAS2R46P59540 309 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 PJVKQ0ZLH3 352 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 FXYD3Q14802 87 aa19.4■□□□□ 0.7
PMS1-220ENST00000618056 VMA21Q3ZAQ7 101 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms