RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NMSQ5H8A3 153 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 PRIMA1Q86XR5 153 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 ABHD12Q8N2K0 398 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 FAM168AQ92567 244 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 CLCC1Q96S66 551 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 GSX2Q9BZM3 304 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 COA4Q9NYJ1 87 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 K7EPK0 472 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 TAAR5O14804 337 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 FCGR3BO75015 233 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 ROS1P08922 2347 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 NQO2P16083 231 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 EPHA1P21709 976 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF816Q0VGE8 651 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 IL15RAQ13261 267 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 EIF4EBP1Q13541 118 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 GPR157Q5UAW9 335 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 C1orf122Q6ZSJ8 110 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 FGFRL1Q8N441 504 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 OR4D5Q8NGN0 318 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 LEAP2Q969E1 77 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 GPHA2Q96T91 129 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 CLEC7AQ9BXN2 247 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 SLC25A31Q9H0C2 315 aa13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-210ENST00000617904 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 IGHV3-7P01780 117 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 PAX1P15863 534 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 MC5RP33032 325 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 CEACAM3P40198 252 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 P2RY1P47900 373 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 RAB13P51153 203 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF134P52741 427 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 DLX6P56179 175 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 RPL23AP62750 156 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 LAMTOR1Q6IAA8 161 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 SLC51BQ86UW2 128 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 OR8H1Q8NGG4 311 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 ARPC5LQ9BPX5 153 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 NARFLQ9H6Q4 476 aa13.73□□□□□ -0.21
TRAPPC3-210ENST00000617904 KIAA1324LA8MWY0 1029 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 RGS13O14921 159 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 KRASP01116 189 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 RPL30P62888 115 aaKnown RBP13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 NDUFA5Q16718 116 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF585BQ52M93 769 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF833PQ6ZTB9 187 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF525Q8N782 197 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 AQP10Q96PS8 301 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 PCGF1Q9BSM1 259 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 PLSCR3Q9NRY6 295 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
TRAPPC3-210ENST00000617904 CSPG4Q6UVK1 2322 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 A0A1W2PPE3 182 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 SLC31A2O15432 143 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 BCL2L11O43521 198 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 CXCL2P19875 107 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 RPL12P30050 165 aaKnown RBP13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 RAB14P61106 215 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 UBA52P62987 128 aaKnown RBP13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 NCR3LG1Q68D85 454 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 CIB3Q96Q77 187 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 RNF126Q9BV68 326 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 KPTNQ9Y664 436 aa13.71□□□□□ -0.21
TRAPPC3-210ENST00000617904 USF3Q68DE3 2245 aa13.71□□□□□ -0.22
TRAPPC3-210ENST00000617904 KIAA2026Q5HYC2 2103 aa13.71□□□□□ -0.22
TRAPPC3-210ENST00000617904 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 LINC00473A8K010 186 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 A8MXK9 166 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 NDUFS7O75251 213 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 MMP23AO75900 390 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 S1PR2O95136 353 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 GAPDHP04406 335 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 ID3Q02535 119 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 EIF5AL1Q6IS14 154 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 OR4A16Q8NH70 328 aa13.7□□□□□ -0.22
TRAPPC3-210ENST00000617904 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms