RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ID3Q02535 119 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 RASL11AQ6T310 242 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 TCF24Q7RTU0 167 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 C5orf30Q96GV9 206 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 HARBI1Q96MB7 349 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 OSTCQ9NRP0 149 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 AP5S1Q9NUS5 200 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 RNF7Q9UBF6 113 aa8.8□□□□□ -1
CUL4A-212ENST00000617546 SLC25A10Q9UBX3 287 aaPredicted RBP8.8□□□□□ -1
CUL4A-212ENST00000617546 TNFSF15O95150 251 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 DLX1P56177 255 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 CXorf67Q86X51 503 aaPredicted RBP8.79□□□□□ -1
CUL4A-212ENST00000617546 MS4A6AQ9H2W1 248 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 JKAMPQ9P055 326 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 NUP214P35658 2090 aaPredicted RBP8.79□□□□□ -1
CUL4A-212ENST00000617546 DICER1Q9UPY3 1922 aaKnown RBP8.79□□□□□ -1
CUL4A-212ENST00000617546 IGHV3-64DA0A0J9YX35 117 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 OR4C46A6NHA9 309 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 B4E171 279 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 IL11P20809 199 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 UQCRFS1P47985 274 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 PLXNB2O15031 1838 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 IGHV2-70P01814 119 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 MC5RP33032 325 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 RPL11P62913 178 aaKnown RBP8.79□□□□□ -1
CUL4A-212ENST00000617546 IGHV1OR15-9A0A0B4J2B8 117 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 PRRG2O14669 202 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 MST1P26927 711 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 PTGDSP41222 190 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 ZNF137PP52743 207 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 SLC35E4Q6ICL7 350 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 OR8B2Q96RD0 313 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 PLA2G2FQ9BZM2 168 aa8.79□□□□□ -1
CUL4A-212ENST00000617546 TRAV17A0A0B4J275 112 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 C5orf67F2Z3F1 127 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZG16O60844 167 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 CRYBB3P26998 211 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 HIST1H1AQ02539 215 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 P2RY6Q15077 328 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 TNXAQ16473 311 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 TTC32Q5I0X7 151 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ACTL10Q5JWF8 245 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 SPRED2Q7Z698 418 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF256Q9Y2P7 627 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 LY96Q9Y6Y9 160 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 AREGP15514 252 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 CTSSP25774 331 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 CCL11P51671 97 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 FBXW9Q5XUX1 488 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 FAM166AQ6J272 317 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 UCN2Q96RP3 112 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 SIPA1L1O43166 1804 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 FAM90A9PA6NNJ1 464 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 SERF1AO75920 110 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 RND2P52198 227 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 HOXA4Q00056 320 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 LINC01559Q495D7 138 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 VASH2Q86V25 355 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 IGKV3-11P04433 115 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 RPL31P62899 125 aaKnown RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 TBR1Q16650 682 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 C16orf47Q6ZP98 133 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 SFTPA2Q8IWL1 248 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 SFTPA1Q8IWL2 248 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 PLPPR1Q8TBJ4 325 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 COPS9Q8WXC6 57 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 CHCHD1Q96BP2 118 aaKnown RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 SIP14410 1827 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF716A6NP11 495 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF324O75467 553 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 CELA2BP08218 269 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 CXCL1P09341 107 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 CCL2P13500 99 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 CCL20P78556 96 aa8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF784Q8NCA9 323 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 ZNF703Q9H7S9 590 aaPredicted RBP8.78□□□□□ -1
CUL4A-212ENST00000617546 PRDX2P32119 198 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 CKS2P33552 79 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 PSG9Q00887 426 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 RELQ04864 619 aaPredicted RBP8.77□□□□□ -1
CUL4A-212ENST00000617546 HYAL1Q12794 435 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 TUSC5Q8IXB3 177 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 STPG3Q8N7X2 389 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 DIRC2Q96SL1 478 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 NABP2Q9BQ15 211 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 TINAGQ9UJW2 476 aa8.77□□□□□ -1
CUL4A-212ENST00000617546 GOSR1O95249 250 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 ADMP35318 185 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 GAGE1Q13065 139 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 SLC25A53Q5H9E4 307 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
CUL4A-212ENST00000617546 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 LINC00470Q9BZP3 86 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 TCFL5Q9UL49 500 aa8.77□□□□□ -1.01
CUL4A-212ENST00000617546 SPINT1O43278 529 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms