RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 OR11H2Q8NH07 326 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SLC25A21Q9BQT8 299 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 C19orf24Q9BVV8 132 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 GSX1Q9H4S2 264 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 FREM3P0C091 2139 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 UBE2E1P51965 193 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 HLA-DRB5Q30154 266 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ARL6IP6Q8N6S5 226 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 GGTLC1Q9BX51 225 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RPL34P49207 117 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 SPANXN5Q5MJ07 72 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 KDM8Q8N371 416 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CNRIP1Q96F85 164 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 FAM210BQ96KR6 192 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SNRPGP15A8MWD9 76 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 K7EPK0 472 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 PLPP3O14495 311 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TMPRSS11DO60235 418 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ASPHD2Q6ICH7 369 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FAM71E2Q8N5Q1 922 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OSR1Q8TAX0 266 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 PDCD6O75340 191 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SSBP1Q04837 148 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 TRAF4Q9BUZ4 470 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 CHIAQ9BZP6 476 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 PMCHP20382 165 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CDKN2AP42771 156 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 TREML4Q6UXN2 200 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TMEM160Q9NX00 188 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CNOT2Q9NZN8 540 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 PGA5P0DJD9 388 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ERFP50548 548 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 PPP1R8Q12972 351 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 GPHB5Q86YW7 130 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 MS4A10Q96PG2 267 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TMEM133Q9H2Q1 129 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ZNF230Q9UIE0 474 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 B9D1Q9UPM9 204 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 A0A0B4J2E0 115 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 A0A1B0GX12 115 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 F5H0A9 414 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 F5H768 121 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SMLR1H3BR10 107 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 NTF3P20783 257 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FGF7P21781 194 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RPL5P46777 297 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 METAP1DQ6UB28 335 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 IDO2Q6ZQW0 420 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CPOQ8IVL8 374 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 STPG2Q8N412 459 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 DRAM1Q8N682 238 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OR11H4Q8NGC9 324 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ABHD14BQ96IU4 210 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 UBQLN3Q9H347 655 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ICOSQ9Y6W8 199 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SRRM5B3KS81 715 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SHISA8B8ZZ34 492 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FXYD3Q14802 87 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FAM90A2PQ658T7 463 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OR5T1Q8NG75 326 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 MPDZO75970 2070 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FXYD6-FXYD2A0A087WZ82 144 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RPL36A-HNRNPH2H7BZ11 118 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 PDGFAP04085 211 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CCR6P51684 374 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CEACAM21Q3KPI0 293 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ZFP82Q8N141 532 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 NABP1Q96AH0 204 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FXYD6Q9H0Q3 95 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SLC35B3Q9H1N7 401 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CD300AQ9UGN4 299 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SELENOFO60613 162 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PTHLHP12272 177 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SAXO1Q8IYX7 474 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SLC25A46Q96AG3 418 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 C12orf57Q99622 126 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CMC2Q9NRP2 79 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TRAV14DV4A0A0A6YYC5 116 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 A0A0U1RQV5 110 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ELANEP08246 267 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PI3P19957 117 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 BLOC1S1P78537 153 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR20EP86478 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR20CP86479 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR20DP86480 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR20BP86481 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR20AP86496 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PAQR9Q6ZVX9 377 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 OTOSQ8NHW6 89 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ATOH8Q96SQ7 321 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TMEM178BH3BS89 294 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TNFSF12O43508 249 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 IGHG3P01860 377 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 HTR1FP30939 366 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 LSM3P62310 102 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF660Q6AZW8 331 aaPredicted RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 VN1R17PQ8TDU5 208 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 POLEQ07864 2286 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 KLF7O75840 302 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms