RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NDUFB6O95139 128 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 CRYZL1O95825 349 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 F2RP25116 425 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 CNTFRP26992 372 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 KIR2DS2P43631 304 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 F2RL1P55085 397 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 POC5Q8NA72 575 aa12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 ADAD2Q8NCV1 583 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-204ENST00000617222 TEX13DA0A0J9YY54 714 aaPredicted RBP12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 FAM181BA6NEQ2 426 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 NCBP2LA6PVI3 153 aaKnown RBP12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 SHOXO15266 292 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 RAMP3O60896 148 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 DEFA1P59665 94 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 DEFA3P59666 94 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 C16orf82Q7Z2V1 217 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 OR4C13Q8NGP0 309 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 RNF5Q99942 180 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 RAB18Q9NP72 206 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 FLVCR2Q9UPI3 526 aa12.46□□□□□ -0.41
PCDHGC3-204ENST00000617222 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 AKR1C4P17516 323 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 SLC6A1P30531 599 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 LPAR6P43657 344 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 MMDQ15546 238 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 OR4S2Q8NH73 311 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 TMEM230Q96A57 120 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 TSNAXQ99598 290 aaKnown RBP12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 LIN7CQ9NUP9 197 aaKnown RBP12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 MOB4Q9Y3A3 225 aa12.45□□□□□ -0.42
PCDHGC3-204ENST00000617222 SETD2Q9BYW2 2564 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 C3orf85A0A1B0GTC6 90 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 NBR2O15453 112 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 TCRBP04435 133 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 CRYBA1P05813 215 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 VSIG10L2P0DP72 767 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 LGALS7P47929 136 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 SP6Q3SY56 376 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 ZNF585BQ52M93 769 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 SGPP2Q8IWX5 399 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 TCTEX1D1Q8N7M0 179 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 Q8N9W7 124 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 NPBQ8NG41 125 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 TAF15Q92804 592 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 TP53RKQ96S44 253 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
PCDHGC3-204ENST00000617222 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 SH2D7A6NKC9 451 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 H0Y980 276 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 RRHO14718 337 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 ARPC1BO15143 372 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 HPRT1P00492 218 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 AMY1AP04745 511 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 BLCAPP62952 87 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 PSG5Q15238 335 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 NRARPQ7Z6K4 114 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 CENPSQ8N2Z9 138 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 C5orf56Q8N8D9 126 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 OSR1Q8TAX0 266 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 ENKURQ8TC29 256 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 KCNIP3Q9Y2W7 256 aa12.43□□□□□ -0.42
PCDHGC3-204ENST00000617222 TRAV6A0A075B6T7 132 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 M0QZK8 103 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 FGF16O43320 207 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 SLC25A17O43808 307 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 S1PR2O95136 353 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 NDUFA3O95167 84 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 SERPINE2P07093 398 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 DCTN2Q13561 401 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 SSX9Q7RTT3 188 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 VKORC1L1Q8N0U8 176 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 RASL11BQ9BPW5 248 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 NPFFR1Q9GZQ6 430 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 C20orf85Q9H1P6 137 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 PALMDQ9NP74 551 aa12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 METTL1Q9UBP6 276 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-204ENST00000617222 SPDEFO95238 335 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 HRASP01112 189 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 RPA2P15927 270 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms