RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TRAT1Q6PIZ9 186 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 TMEM252Q8N6L7 170 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 OR5C1Q8NGR4 320 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 ZNF714Q96N38 554 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 ABCA12Q86UK0 2595 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 LINC00862A6NCI5 91 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 CRYZL1O95825 349 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 OR9G9P0C7N8 305 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 DYNLT3P51808 116 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 ARHGDIBP52566 201 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 CATR1Q13166 79 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 C8orf86Q6ZUL3 223 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 ZNF251Q9BRH9 671 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 TOLLIPQ9H0E2 274 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 C11orf1Q9H5F2 150 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 CBLN4Q9NTU7 201 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 LINC00312Q9Y6C7 94 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 A0A1B0GU03 582 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 CLEC18AA5D8T8 446 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 TMEM8BA6NDV4 472 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 AGPAT2O15120 278 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 GPR137BO60478 399 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 SCO1O75880 301 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 DANCRP0C864 163 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 RRASP10301 218 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 DAOP14920 347 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 P2RY1P47900 373 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 RUNX1Q01196 453 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 ARL16Q0P5N6 197 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 ZNF383Q8NA42 475 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 CLEC18CQ8NCF0 446 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 IL22RA2Q969J5 263 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 R3HDM4Q96D70 268 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 RPUSD1Q9UJJ7 312 aaKnown RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 TET2Q6N021 2002 aaPredicted RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 ZANQ9Y493 2812 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 ZNF729A6NN14 1252 aaPredicted RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 RNF212BA8MTL3 300 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 J3KRW8 73 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 SYNGR2O43760 224 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 EIF3GO75821 320 aaKnown RBP eCLIP6.38□□□□□ -1.39
NEK3-207ENST00000617054 ZNF439Q8NDP4 499 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 HSD17B10Q99714 261 aaKnown RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 SLC25A32Q9H2D1 315 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
NEK3-207ENST00000617054 LYRM2Q9NU23 88 aaPredicted RBP6.38□□□□□ -1.39
NEK3-207ENST00000617054 IGHV3-72A0A0B4J1Y9 119 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 ZNF705EA8MWA4 302 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 RAB29O14966 203 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 FAM157CP0CG43 387 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 PVALBP20472 110 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 UBE2KP61086 200 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 ESCO2Q56NI9 601 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 OR8G2PQ6IF36 304 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 ZNF841Q6ZN19 808 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 S1PR3Q99500 378 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 REG4Q9BYZ8 158 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 RAB1BQ9H0U4 201 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 HRH4Q9H3N8 390 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 RBKSQ9H477 322 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 SEBOXQ9HB31 216 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 PSENENQ9NZ42 101 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 MMP24Q9Y5R2 645 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 UBR5O95071 2799 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 A0A1W2PRD5 423 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 A0A1W2PRF3 423 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 A0A1W2PRM7 423 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 SRRM4A7MD48 611 aaKnown RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 SNAPC5O75971 98 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 CT45A6P0DMU7 189 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 CT45A5P0DMU8 189 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 CT45A7P0DMV0 189 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 AANATQ16613 207 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 ZNF66Q6ZN08 573 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 C11orf42Q8N5U0 333 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 STOML3Q8TAV4 291 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 CORO2AQ92828 525 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 LSM10Q969L4 123 aaKnown RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 TMEM231Q9H6L2 316 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 USP9YO00507 2555 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 DUXBA0A1W2PPF3 345 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 TNFRSF9Q07011 255 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 NRGNQ92686 78 aa6.37□□□□□ -1.39
NEK3-207ENST00000617054 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
NEK3-207ENST00000617054 ABCA1O95477 2261 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 MED6O75586 246 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 IFNA17P01571 189 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 IGHV2-70P01814 119 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 COX7A1P24310 79 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms