RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 TMEM249Q2WGJ8 235 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 NUFIP2Q7Z417 695 aaKnown RBP9.41□□□□□ -0.9
ATF3-211ENST00000613954 MRPL52Q86TS9 123 aaKnown RBP9.41□□□□□ -0.9
ATF3-211ENST00000613954 TCTEX1D1Q8N7M0 179 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 SCNM1Q9BWG6 230 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
ATF3-211ENST00000613954 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 WIPI2Q9Y4P8 454 aa9.41□□□□□ -0.9
ATF3-211ENST00000613954 LRRC30A6NM36 301 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 PAGE4O60829 102 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 NGFP01138 241 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 OR10J1P30954 320 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 FOXL1Q12952 345 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 C1orf194Q5T5A4 169 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 PRR18Q8N4B5 295 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 ZNF645Q8N7E2 425 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 TXNDC17Q9BRA2 123 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 POLDIP2Q9Y2S7 368 aa9.4□□□□□ -0.9
ATF3-211ENST00000613954 ZNF407Q9C0G0 2248 aa9.4□□□□□ -0.91
ATF3-211ENST00000613954 PMS2P5A8MQ11 134 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 F6UZH7 168 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 HMGB3O15347 200 aaKnown RBP9.39□□□□□ -0.91
ATF3-211ENST00000613954 CDC34P49427 236 aaPredicted RBP9.39□□□□□ -0.91
ATF3-211ENST00000613954 C9orf135Q5VTT2 229 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 RAB1CQ92928 201 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 SARAFQ96BY9 339 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 GMPPAQ96IJ6 420 aaPredicted RBP9.39□□□□□ -0.91
ATF3-211ENST00000613954 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 RTL8AQ9BWD3 113 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 KCNIP1Q9NZI2 227 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 CLCF1Q9UBD9 225 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 TRAPPC1Q9Y5R8 145 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 KIAA2026Q5HYC2 2103 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 M0QZK8 103 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 OR2H2O95918 312 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 SCGB1D1O95968 90 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 P0C879 139 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 RAC2P15153 192 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 IL3RAP26951 378 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 BPIFB3P59826 476 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 RPL15P61313 204 aaKnown RBP9.39□□□□□ -0.91
ATF3-211ENST00000613954 FAM78BQ5VT40 261 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 Q6ZS92 163 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 LINC01551Q86U37 167 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 KCNIP2Q9NS61 270 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 PXMP4Q9Y6I8 212 aa9.39□□□□□ -0.91
ATF3-211ENST00000613954 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 KIR2DL5BA0A0G2JN68 375 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 KIR2DL5BA0A0G2JPC4 375 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 A0A0U1RQK1 487 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 ODAMA1E959 279 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 SIRPB1O00241 398 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 EREGO14944 169 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 RAB29O14966 203 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 RHBDL1O75783 438 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 OR4A8P0C604 315 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 GNB2P62879 340 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 KIR2DL5AQ8N109 375 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 GATAD1Q8WUU5 269 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 TAAR6Q96RI8 345 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 C12orf49Q9H741 205 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 NAGKQ9UJ70 344 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 A0A1W2PR80 420 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 TMEM210A6NLX4 147 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 SH2D1BO14796 132 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 WISP2O76076 250 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 CHRNA7P36544 502 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 FOXG1P55316 489 aaPredicted RBP9.38□□□□□ -0.91
ATF3-211ENST00000613954 UBE2NP61088 152 aaKnown RBP9.38□□□□□ -0.91
ATF3-211ENST00000613954 ZNF146Q15072 292 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 BTNL3Q6UXE8 466 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 TRIB1Q96RU8 372 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 SNHG12Q9BXW3 62 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 CLN8Q9UBY8 286 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
ATF3-211ENST00000613954 DNAJC13O75165 2243 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 J3QW42 95 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 CLDN14O95500 239 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 KRASP01116 189 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 CA6P23280 308 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 G6PCP35575 357 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 FBXW9Q5XUX1 488 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 RBMXL3Q8N7X1 1067 aaKnown RBP9.37□□□□□ -0.91
ATF3-211ENST00000613954 WDR31Q8NA23 367 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
ATF3-211ENST00000613954 GALMQ96C23 342 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 R3HDM4Q96D70 268 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 MS4A10Q96PG2 267 aa9.37□□□□□ -0.91
ATF3-211ENST00000613954 NCOR1P1Q9H4R4 102 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms