RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MED29Q9NX70 200 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 K7ESM1 405 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TNFSF10P50591 281 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SYT14P1Q58G82 188 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR8D4Q8NGM9 314 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SIGLEC7Q9Y286 467 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 KLK8O60259 260 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TCRBP04435 133 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CEACAM16Q2WEN9 425 aa9.43□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LOC102723996A0A087X1L8 192 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 IGHG3P01860 377 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PSMB1P20618 241 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RPS27P42677 84 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GATA4P43694 442 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NT5CQ8TCD5 201 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 VEGFBP49765 207 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ASCL5Q7RTU5 278 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NANOGP1Q8N7R0 232 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PRDX1Q06830 199 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GAGE2AQ6NT46 116 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TET1Q8NFU7 2136 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 A0A087WW49 117 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C15orf61A6NNL5 157 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 K7ERS5 55 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR8B12Q8NGG6 310 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SEMA5BQ9P283 1151 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LOC107986453A0A1B0GWG9 222 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CTSGP08311 255 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR2T7P0C7T2 308 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MDKP21741 143 aaPredicted RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PSMB6P28072 239 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SMAD4Q13485 552 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CA13Q8N1Q1 262 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 WNT2BQ93097 391 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 Q96M85 177 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SAP30O75446 220 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ALX3O95076 343 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GPR75O95800 540 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SAXO2Q658L1 398 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MRM1Q6IN84 353 aaKnown RBP9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TMEM99Q8N816 258 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ST6GALNAC6Q969X2 333 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MS4A8Q9BY19 250 aa9.42□□□□□ -0.9
CNTNAP3B-211ENST00000612828 COL4A1P02462 1669 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NUP98P52948 1817 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 FCMRO60667 390 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ZFPL1O95159 310 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TRGV3P03979 118 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LINC00869P0C866 280 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SLC39A5Q6ZMH5 540 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C8orf46Q8TAG6 207 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HS3ST2Q9Y278 367 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ANKRD31Q8N7Z5 1873 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CD7P09564 240 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ASB10Q8WXI3 467 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SYNGR3O43761 229 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MMP9P14780 707 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 BHLHA9Q7RTU4 235 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PPP1R1CQ8WVI7 109 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SPSB1Q96BD6 273 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 WFIKKN1Q96NZ8 548 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 NABP2Q9BQ15 211 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 GPR132Q9UNW8 380 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 VDAC2P45880 294 aaPredicted RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PDLIM4P50479 330 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 C9orf50Q5SZB4 431 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR52N1Q8NH53 320 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ZIC3O60481 467 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MPLP40238 635 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 EMDP50402 254 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LHX2P50458 406 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR1F12Q8NHA8 337 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 MRPL24Q96A35 216 aaKnown RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR51B2Q9Y5P1 312 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 SNRPEP62304 92 aaKnown RBP9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 ANAPC16Q96DE5 110 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 VCX2Q9H322 139 aa9.41□□□□□ -0.9
CNTNAP3B-211ENST00000612828 LCN2P80188 198 aa9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 RBM3P98179 157 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 OR5P3Q8WZ94 311 aa9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 HYAL3O43820 417 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 FXYD3Q14802 87 aa9.4□□□□□ -0.9
CNTNAP3B-211ENST00000612828 TCTN3Q6NUS6 607 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms