RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RTL8BQ17RB0 113 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 GGNBP1Q5YKI7 109 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 MOB3BQ86TA1 216 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 OR4S2Q8NH73 311 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 RNASE11Q8TAA1 199 aaKnown RBP14.2□□□□□ -0.14
SREK1-216ENST00000612404 IL22RA2Q969J5 263 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 PDCD10Q9BUL8 212 aa14.2□□□□□ -0.14
SREK1-216ENST00000612404 RANGRFQ9HD47 186 aaPredicted RBP14.2□□□□□ -0.14
SREK1-216ENST00000612404 FAM212BQ9NTI7 297 aaPredicted RBP14.2□□□□□ -0.14
SREK1-216ENST00000612404 IGHV1-3A0A0C4DH29 117 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 J3QLI3 93 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 NPFFO15130 113 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 CRYZL1O95825 349 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 PAX6P26367 422 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 SAA4P35542 130 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 AKR1C2P52895 323 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 SSX2Q16385 188 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 MINOS1Q5TGZ0 78 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 MINOS1-NBL1R4GNA1 71 aa14.19□□□□□ -0.14
SREK1-216ENST00000612404 SETXQ7Z333 2677 aaKnown RBP14.18□□□□□ -0.14
SREK1-216ENST00000612404 IGHV3-72A0A0B4J1Y9 119 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 IGHV1-69DA0A0B4J2H0 117 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 MPTX1A8MV57 137 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 H0YJW9 148 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 TXNL1O43396 289 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 AVPP01185 164 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 IGHV1-69P01742 117 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 RUSC1-AS1Q66K80 236 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 GSG1LQ6UXU4 331 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 OR5AN1Q8NGI8 311 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 C17orf50Q8WW18 174 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 SEC22AQ96IW7 307 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 TBL2Q9Y4P3 447 aaKnown RBP14.18□□□□□ -0.14
SREK1-216ENST00000612404 ACANP16112 2415 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 RBFOX2O43251 390 aaKnown RBP eCLIP14.18□□□□□ -0.14
SREK1-216ENST00000612404 HPRT1P00492 218 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 KRASP01116 189 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 IGKV1-16P04430 117 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 IGHV4-38-2P0DP08 117 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 HLA-GP17693 338 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 G6PCP35575 357 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 MIDNQ504T8 468 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 FYTTD1Q96QD9 318 aaKnown RBP14.18□□□□□ -0.14
SREK1-216ENST00000612404 TMED3Q9Y3Q3 217 aa14.18□□□□□ -0.14
SREK1-216ENST00000612404 VDAC1P21796 283 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 TAGLNQ01995 201 aaKnown RBP14.17□□□□□ -0.14
SREK1-216ENST00000612404 BRD3OSQ6XYD6 125 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 RRNAD1Q96FB5 475 aaKnown RBP14.17□□□□□ -0.14
SREK1-216ENST00000612404 ST6GAL2Q96JF0 529 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 OR10C1Q96KK4 312 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 PLEKHA2Q9HB19 425 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 DUXBA0A1W2PPF3 345 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 A0A1W2PPI3 338 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 RRASP10301 218 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 R3HDM4Q96D70 268 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 WDR89Q96FK6 387 aaPredicted RBP14.17□□□□□ -0.14
SREK1-216ENST00000612404 WASHC3Q9Y3C0 194 aa14.17□□□□□ -0.14
SREK1-216ENST00000612404 MARCH11A6NNE9 402 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 TIMM23O14925 209 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 ATG12O94817 140 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 IGKV1-5P01602 117 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 MC5RP33032 325 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 RAB13P51153 203 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 IAH1Q2TAA2 248 aaPredicted RBP14.16□□□□□ -0.14
SREK1-216ENST00000612404 DHRS7BQ6IAN0 325 aaPredicted RBP14.16□□□□□ -0.14
SREK1-216ENST00000612404 CCDC144NLQ6NUI1 221 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 SSX9Q7RTT3 188 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 DYNAPQ8N1N2 210 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 GSKIPQ9P0R6 139 aa14.16□□□□□ -0.14
SREK1-216ENST00000612404 GIPP09681 153 aaPredicted RBP14.15□□□□□ -0.14
SREK1-216ENST00000612404 PDPNQ86YL7 162 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 VKORC1L1Q8N0U8 176 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 DMBX1Q8NFW5 382 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 FLYWCH2Q96CP2 140 aaKnown RBP14.15□□□□□ -0.14
SREK1-216ENST00000612404 MALSU1Q96EH3 234 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 A0A0G2JRQ6 117 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 OR2A4O95047 310 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 NQO2P16083 231 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 ERVK-16P61578 105 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 IZUMO4Q1ZYL8 232 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 NMSQ5H8A3 153 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 KLF17Q5JT82 389 aaPredicted RBP14.15□□□□□ -0.14
SREK1-216ENST00000612404 OR2A7Q96R45 310 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 COMMD9Q9P000 198 aa14.15□□□□□ -0.14
SREK1-216ENST00000612404 OOSP1A8MZH6 123 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 SHOXO15266 292 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 H2BFWTQ7Z2G1 175 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 AJUBAQ96IF1 538 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 C2orf50Q96LR7 162 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 HARBI1Q96MB7 349 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 RANBP3Q9H6Z4 567 aaPredicted RBP14.14□□□□□ -0.15
SREK1-216ENST00000612404 SMLR1H3BR10 107 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 HRASP01112 189 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 RAP2BP61225 183 aa14.14□□□□□ -0.15
SREK1-216ENST00000612404 RPS16P62249 146 aaKnown RBP14.14□□□□□ -0.15
SREK1-216ENST00000612404 THOC7Q6I9Y2 204 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms