RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
CLTCL1-207ENST00000611723 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-207ENST00000611723 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
CLTCL1-207ENST00000611723 SHPKQ9UHJ6 478 aa12.86□□□□□ -0.35
CLTCL1-207ENST00000611723 SVEP1Q4LDE5 3571 aa12.86□□□□□ -0.35
CLTCL1-207ENST00000611723 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 DUS4LO95620 317 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 CDS2O95674 445 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 APOA2P02652 100 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 RPA2P15927 270 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 VAMP1P23763 118 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 EBI3Q14213 229 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 SP6Q3SY56 376 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 LIAT1Q6ZQX7 453 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 THNSL2Q86YJ6 484 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 SPAG16Q8N0X2 631 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 PRDM13Q9H4Q3 707 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 WASHC3Q9Y3C0 194 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-207ENST00000611723 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 A0A0A6YYJ9 748 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 PIGBOS1A0A0B4J2F0 54 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 TIMM23O14925 209 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 FCGR3BO75015 233 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 HPRT1P00492 218 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 FBP1P09467 338 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 HNF1AP20823 631 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 BRS3P32247 399 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 RAB13P51153 203 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 SRPXP78539 464 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 OR4S2Q8NH73 311 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 IL22RA2Q969J5 263 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 RNF5Q99942 180 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 PLEKHA2Q9HB19 425 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
CLTCL1-207ENST00000611723 CREBL2O60519 120 aaPredicted RBP12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 RAMP3O60896 148 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 VENTXO95231 258 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 SERPINE2P07093 398 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 LPAR6P43657 344 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 TMEM177Q53S58 311 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 CADM3Q8N126 398 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 LGI3Q8N145 548 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 COQ8AQ8NI60 647 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 CASTOR1Q8WTX7 329 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
CLTCL1-207ENST00000611723 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 PAX6P26367 422 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 CBX3Q13185 183 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 C12orf45Q8N5I9 185 aaPredicted RBP12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 OR4C13Q8NGP0 309 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 OSR1Q8TAX0 266 aaPredicted RBP12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 FLYWCH2Q96CP2 140 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 PHB2Q99623 299 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 COMMD9Q9P000 198 aa12.82□□□□□ -0.36
CLTCL1-207ENST00000611723 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 DUXBA0A1W2PPF3 345 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 DBX1A6NMT0 343 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 H7C2Y5 167 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 CRYZL1O95825 349 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 LGALS7P47929 136 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 POU2AF1Q16633 256 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 OR2B11Q5JQS5 317 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 RBPMSQ93062 196 aaKnown RBP12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 AIFM2Q9BRQ8 373 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
CLTCL1-207ENST00000611723 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 ATG12O94817 140 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 S1PR2O95136 353 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 MOSP00540 346 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 SNRNP70P08621 437 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 FAM106CPP0CH98 169 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 NQO2P16083 231 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 HLA-GP17693 338 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 LRRC75BQ2VPJ9 315 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 TMEM268Q5VZI3 342 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms