RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 VN1R17PQ8TDU5 208 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 ITLN1Q8WWA0 313 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 K7N7A8 449 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 M0R2Z0 102 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 CLEC3BP05452 202 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 CD5P06127 495 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 CFPP27918 469 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 SSTR5P35346 364 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 CLDND2Q8NHS1 167 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 STARD4Q96DR4 205 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 IGKV1-12A0A0C4DH73 117 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 IGKV1D-12P01611 117 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 ZIC4Q8N9L1 334 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 CCL13Q99616 98 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 CALYQ9NYX4 217 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 SRCAPQ6ZRS2 3230 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 C12orf77C9JDV5 145 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
CDH1-212ENST00000611625 ELOBQ15370 118 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 SLC35E4Q6ICL7 350 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 NABP1Q96AH0 204 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 WBP1Q96G27 269 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 A0A087WWC5 75 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 SLC31A2O15432 143 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 REG1BP48304 166 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 FOXD3Q9UJU5 478 aaPredicted RBP10.56□□□□□ -0.72
CDH1-212ENST00000611625 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 CBY1Q9Y3M2 126 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
CDH1-212ENST00000611625 C5orf63A6NC05 138 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 WNT9BO14905 357 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 WNT5AP41221 380 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 HIST3H3Q16695 136 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 CYP2G1PQ6ZSU1 146 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 PNRC2Q9NPJ4 139 aaKnown RBP10.56□□□□□ -0.72
CDH1-212ENST00000611625 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
CDH1-212ENST00000611625 M0QZK8 103 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 NKX2-8O15522 239 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 GGCTO75223 188 aaKnown RBP10.55□□□□□ -0.72
CDH1-212ENST00000611625 SNRNP200O75643 2136 aaKnown RBP10.55□□□□□ -0.72
CDH1-212ENST00000611625 PAFAH1B2P68402 229 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 FOXJ2Q9P0K8 574 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 NCBP2LA6PVI3 153 aaKnown RBP10.55□□□□□ -0.72
CDH1-212ENST00000611625 HSPE1P61604 102 aaKnown RBP10.55□□□□□ -0.72
CDH1-212ENST00000611625 SLC35B1P78383 322 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 CCL8P80075 99 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 Q56UQ5 140 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 ZNF525Q8N782 197 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 OR4D5Q8NGN0 318 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 PERPQ96FX8 193 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 P01737 135 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 EGR1P18146 543 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 BRS3P32247 399 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 ID3Q02535 119 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 PQLC2Q6ZP29 291 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 PRSS3P2Q8NHM4 247 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 Q8WTZ3 238 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 HSPB9Q9BQS6 159 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 SLC25A10Q9UBX3 287 aaPredicted RBP10.55□□□□□ -0.72
CDH1-212ENST00000611625 RNF24Q9Y225 148 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 MT-ND6P03923 174 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 ATP1A1-AS1Q5TC04 95 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 ABHD12Q8N2K0 398 aa10.55□□□□□ -0.72
CDH1-212ENST00000611625 AHRRA9YTQ3 701 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 APCSP02743 223 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 ICAM4Q14773 271 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 MFAP2P55001 183 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 WDFY1Q8IWB7 410 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 OR8I2Q8N0Y5 310 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 FGFBP3Q8TAT2 258 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 PAXXQ9BUH6 204 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 MRPS18CQ9Y3D5 142 aaKnown RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 KLF7O75840 302 aaPredicted RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
CDH1-212ENST00000611625 COL8A1P27658 744 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 BET1LQ9NYM9 111 aa10.54□□□□□ -0.72
CDH1-212ENST00000611625 COLCA2A8K830 154 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 SMPD2O60906 423 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 HOXA5P20719 270 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 VKORC1L1Q8N0U8 176 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 QTRT1Q9BXR0 403 aaKnown RBP10.53□□□□□ -0.72
CDH1-212ENST00000611625 GP6Q9HCN6 339 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 DIRC3C9JPN6 131 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 CSN3P07498 182 aa10.53□□□□□ -0.72
CDH1-212ENST00000611625 CCL20P78556 96 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms