RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MPV17P39210 176 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 TEX38Q6PEX7 206 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 LSM10Q969L4 123 aaKnown RBP17.11■□□□□ 0.33
SSBP3-216ENST00000610401 RTL8AQ9BWD3 113 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 PLCE1Q9P212 2302 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 CDC34P49427 236 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-216ENST00000610401 ZNF705AQ6ZN79 300 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-216ENST00000610401 SGMS2Q8NHU3 365 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 FAM173AQ9BQD7 235 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 TTC28Q96AY4 2481 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 CTXND1A0A1B0GTU2 59 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 LRRC30A6NM36 301 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 A8MWP6 167 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 IL3RAP26951 378 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 PPP1CBP62140 327 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 ABHD12Q8N2K0 398 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 PIEZO2Q9H5I5 2752 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 TCAPO15273 167 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 ACTL6BO94805 426 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 TDRG1Q3Y452 100 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 SAXO1Q8IYX7 474 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 NEIL1Q96FI4 390 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-216ENST00000610401 P2RX4Q99571 388 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 MPC1Q9Y5U8 109 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 OR5B21A6NL26 309 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 NTN3O00634 580 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-216ENST00000610401 FAM122AQ96E09 287 aa17.1■□□□□ 0.33
SSBP3-216ENST00000610401 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-216ENST00000610401 BRWD1-AS2P59051 145 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 MIC13Q5XKP0 118 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 FAM103A1Q9BTL3 118 aaKnown RBP17.09■□□□□ 0.33
SSBP3-216ENST00000610401 TMEM147Q9BVK8 224 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 BDP1A6H8Y1 2624 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 GNB1P62873 340 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 TMEM14EPQ6UXP3 125 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 CTDSP1Q9GZU7 261 aa17.09■□□□□ 0.33
SSBP3-216ENST00000610401 HEYLQ9NQ87 328 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-216ENST00000610401 A6NNC1 897 aa17.08■□□□□ 0.33
SSBP3-216ENST00000610401 CBLN1P23435 193 aa17.08■□□□□ 0.33
SSBP3-216ENST00000610401 MEOX1P50221 254 aa17.08■□□□□ 0.33
SSBP3-216ENST00000610401 PSG7Q13046 419 aa17.08■□□□□ 0.33
SSBP3-216ENST00000610401 AQP7O14520 342 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 RBFOX2O43251 390 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■□□□□ 10.7
SSBP3-216ENST00000610401 UBE2NP61088 152 aaKnown RBP17.08■□□□□ 0.32
SSBP3-216ENST00000610401 SSPNQ14714 243 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 MSMO1Q15800 293 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 TMEM242Q9NWH2 141 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-216ENST00000610401 MYOD1P15172 320 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 TAS2R60P59551 318 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 OR13A1Q8NGR1 328 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 TMEM18Q96B42 140 aa17.08■□□□□ 0.32
SSBP3-216ENST00000610401 CACNA1HO95180 2353 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 TRAV3A0A0B4J244 114 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 CNN1P51911 297 aaKnown RBP17.07■□□□□ 0.32
SSBP3-216ENST00000610401 UTF1Q5T230 341 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 SCO2A0A1W2PP80 73 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 HOXA6P31267 233 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 SLC10A1Q14973 349 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 TBC1D28Q2M2D7 210 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 GNG12Q9UBI6 72 aa17.07■□□□□ 0.32
SSBP3-216ENST00000610401 IGHV3OR15-7A0A075B7D8 119 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 MARCH11A6NNE9 402 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 ARL14EPLP0DKL9 152 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 RPL39P5Q59GN2 51 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 OR9G9P0C7N8 305 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 OR6C3Q9NZP0 311 aa17.06■□□□□ 0.32
SSBP3-216ENST00000610401 RRHO14718 337 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 C21orf62-AS1Q17RA5 79 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 RNFT1Q5M7Z0 435 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 ZNF645Q8N7E2 425 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 TMEM45BQ96B21 275 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 MS4A10Q96PG2 267 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 FKBP11Q9NYL4 201 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 PAM16Q9Y3D7 125 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 CD82P27701 267 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 OR5I1Q13606 314 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 RNPS1Q15287 305 aaKnown RBP17.05■□□□□ 0.32
SSBP3-216ENST00000610401 KIAA1644Q3SXP7 199 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 PDLIM3Q53GG5 364 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-216ENST00000610401 PRAMEF5Q5TYX0 476 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 SPATA31B1PQ5VZV4 182 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 TOMM20LQ6UXN7 152 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 HSPB7Q9UBY9 170 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 DUSP13Q9UII6 198 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 PCSK5Q92824 1860 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 F2Z2F3 143 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 TCL1AP56279 114 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 VHLLQ6RSH7 139 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 LINC01551Q86U37 167 aa17.05■□□□□ 0.32
SSBP3-216ENST00000610401 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 LAMTOR5O43504 91 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 DUSP3P51452 185 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-216ENST00000610401 TMEM170AQ8WVE7 144 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 ZDHHC11Q9H8X9 412 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 MANBALQ9NQG1 85 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 POLDIP2Q9Y2S7 368 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 TRBV20OR9-2A0A075B6H5 130 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 B4E171 279 aa17.04■□□□□ 0.32
SSBP3-216ENST00000610401 C9orf172C9J069 976 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms