RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 OR6F1Q8NGZ6 308 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 LINC00527Q9UJ94 153 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 CEPT1Q9Y6K0 416 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 J3QRK9 145 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 CREBL2O60519 120 aaPredicted RBP11.21□□□□□ -0.61
HDDC2-209ENST00000609477 IGLV2-23P01705 113 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 CRYGBP07316 175 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 TBPP20226 339 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
HDDC2-209ENST00000609477 RFX2P48378 723 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 HERV-K104P61576 105 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 LPCAT3Q6P1A2 487 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 C10orf99Q6UWK7 81 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 MFSD4AQ8N468 514 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 MINDY2Q8NBR6 621 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 OR4S2Q8NH73 311 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
HDDC2-209ENST00000609477 SECTM1Q8WVN6 248 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 MOB3AQ96BX8 217 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.61
HDDC2-209ENST00000609477 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
HDDC2-209ENST00000609477 CTDSP2O14595 271 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.629e-6■■□□□ 11.7
HDDC2-209ENST00000609477 SLC25A17O43808 307 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 CRYZL1O95825 349 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 PMP2P02689 132 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 PF4V1P10720 104 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 PSMB8P28062 276 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 HRH1P35367 487 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
HDDC2-209ENST00000609477 UBE2KP61086 200 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 RPL23AP62750 156 aaKnown RBP11.2□□□□□ -0.62
HDDC2-209ENST00000609477 CATR1Q13166 79 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 PYHIN1Q6K0P9 492 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 VSTM2AQ8TAG5 236 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 CD300LFQ8TDQ1 290 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 FCAMRQ8WWV6 532 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 ZNF2Q9BSG1 426 aaPredicted RBP11.2□□□□□ -0.62
HDDC2-209ENST00000609477 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
HDDC2-209ENST00000609477 MIXL1Q9H2W2 232 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 CCL28Q9NRJ3 127 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 MTFP1Q9UDX5 166 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 WNK1Q9H4A3 2382 aa11.2□□□□□ -0.62
HDDC2-209ENST00000609477 GABARAPH6UMI1 98 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 FCN1O00602 326 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 FCGR3BO75015 233 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 CA2P00918 260 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 FCER2P06734 321 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 HLA-DMAP28067 261 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 CD40LGP29965 261 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 TSPAN5P62079 268 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 KHDC1LQ5JSQ8 128 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 VAX1Q5SQQ9 334 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 TMEM65Q6PI78 240 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 TMEM17Q86X19 198 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 LAX1Q8IWV1 398 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 CMTM1Q8IZ96 169 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 TCTEX1D2Q8WW35 142 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 ABHD1Q96SE0 405 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
HDDC2-209ENST00000609477 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
HDDC2-209ENST00000609477 SRRM4A7MD48 611 aaKnown RBP11.18□□□□□ -0.62
HDDC2-209ENST00000609477 CTDSPLO15194 276 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 HRASP01112 189 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 S100GP29377 79 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 GNRHRP30968 328 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 FXYD4P59646 89 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
HDDC2-209ENST00000609477 FXYD3Q14802 87 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 ZNF695Q8IW36 515 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 POC5Q8NA72 575 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 KLK11Q9UBX7 282 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 RSL24D1Q9UHA3 163 aaKnown RBP11.18□□□□□ -0.62
HDDC2-209ENST00000609477 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
HDDC2-209ENST00000609477 A3GALT2U3KPV4 340 aa11.18□□□□□ -0.62
HDDC2-209ENST00000609477 A0A1W2PRX2 142 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 CCDC160A6NGH7 325 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 G3V318 75 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 CNIH1O95406 144 aa11.17□□□□□ -0.62
HDDC2-209ENST00000609477 BRI3O95415 125 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms