RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 FOXRED2Q8IWF2 684 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 ANKRD20A5PA0PJZ0 165 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 GPR31O00270 319 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 RRHO14718 337 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 SHOXO15266 292 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 TNFSF12O43508 249 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 FCGR3BO75015 233 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 IGHG2P01859 326 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
CTSA-219ENST00000607841 CNPY1Q3B7I2 92 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 ZNF818PQ6ZRF7 136 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 LINC00299Q6ZSB3 139 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 POC5Q8NA72 575 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
CTSA-219ENST00000607841 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
CTSA-219ENST00000607841 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
CTSA-219ENST00000607841 CRYZL1O95825 349 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 CNTFRP26992 372 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
CTSA-219ENST00000607841 ECI1P42126 302 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
CTSA-219ENST00000607841 ZNF45Q02386 682 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 PSG5Q15238 335 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 ZNF79Q15937 498 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 AADACL3Q5VUY0 350 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
CTSA-219ENST00000607841 LHFPL1Q86WI0 220 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 TOMM5Q8N4H5 51 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 CD300LFQ8TDQ1 290 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 PRRT1Q99946 306 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
CTSA-219ENST00000607841 METTL1Q9UBP6 276 aaKnown RBP11.3□□□□□ -0.6
CTSA-219ENST00000607841 AP4M1O00189 453 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
CTSA-219ENST00000607841 PGAM2P15259 253 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 OR2B11Q5JQS5 317 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 OR4D10Q8NGI6 311 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 DEDD2Q8WXF8 326 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
CTSA-219ENST00000607841 AIFM2Q9BRQ8 373 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 SRRQ9GZT4 340 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
CTSA-219ENST00000607841 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTSA-219ENST00000607841 SLC25A17O43808 307 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 INPP1P49441 399 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 SLC35B1P78383 322 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 OR4C16Q8NGL9 310 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 ZFAND1Q8TCF1 268 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 MCUBQ9NWR8 336 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
CTSA-219ENST00000607841 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
CTSA-219ENST00000607841 HPRT1P00492 218 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 HRASP01112 189 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 RLN1P04808 185 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 UBE2KP61086 200 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
CTSA-219ENST00000607841 PHLDA2Q53GA4 152 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 ZNF562Q6V9R5 426 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 TRIM63Q969Q1 353 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 CITED1Q99966 193 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 OR51J1Q9H342 316 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
CTSA-219ENST00000607841 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
CTSA-219ENST00000607841 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
CTSA-219ENST00000607841 SRRM4A7MD48 611 aaKnown RBP11.26□□□□□ -0.61
CTSA-219ENST00000607841 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
CTSA-219ENST00000607841 IGF1P05019 195 aa11.26□□□□□ -0.61
CTSA-219ENST00000607841 VDAC1P21796 283 aa11.26□□□□□ -0.61
CTSA-219ENST00000607841 F2RP25116 425 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms