RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RAB5BP61020 215 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 RPL23AP62750 156 aaKnown RBP8.73□□□□□ -1.01
LINC01001-203ENST00000607448 TMEM182Q6ZP80 229 aaPredicted RBP8.73□□□□□ -1.01
LINC01001-203ENST00000607448 OR10V1Q8NGI7 309 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 OR2G3Q8NGZ4 309 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 FAM213BQ8TBF2 198 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 ITLN1Q8WWA0 313 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 SH3BGRL3Q9H299 93 aa8.73□□□□□ -1.01
LINC01001-203ENST00000607448 SAV1Q9H4B6 383 aaPredicted RBP8.73□□□□□ -1.01
LINC01001-203ENST00000607448 TMEM210A6NLX4 147 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 B4DSR2 109 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 IGHV2-5P01817 119 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 HBE1P02100 147 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 CRYBA1P05813 215 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 SERPINE2P07093 398 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 ACAA1P09110 424 aaPredicted RBP8.72□□□□□ -1.01
LINC01001-203ENST00000607448 RAC2P15153 192 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 NFYBP25208 207 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 CXorf66Q5JRM2 361 aaPredicted RBP8.72□□□□□ -1.01
LINC01001-203ENST00000607448 Q6P435 159 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 STX12Q86Y82 276 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 BATF2Q8N1L9 274 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 PLPPR1Q8TBJ4 325 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 OR2V2Q96R30 315 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 HIF1ANQ9NWT6 349 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 IL36RNQ9UBH0 155 aa8.72□□□□□ -1.01
LINC01001-203ENST00000607448 WNK2Q9Y3S1 2297 aa8.71□□□□□ -1.01
LINC01001-203ENST00000607448 MEX3AA1L020 520 aaKnown RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 RNF212BA8MTL3 300 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 AVPP01185 164 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 MT-ND4LP03901 98 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 MSMBP08118 114 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 ZNF44P15621 663 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 TUBG1P23258 451 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 DYNLT3P51808 116 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 HOXA4Q00056 320 aaPredicted RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 CLINT1Q14677 625 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 AWAT1Q58HT5 328 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 FIP1L1Q6UN15 594 aaKnown RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 C1orf229Q6ZS94 237 aaPredicted RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 OR5C1Q8NGR4 320 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 TMEM186Q96B77 213 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 DIRC2Q96SL1 478 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 ATP5SQ99766 215 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 PARP12Q9H0J9 701 aaKnown RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 TMEM106BQ9NUM4 274 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 LIN7CQ9NUP9 197 aaKnown RBP8.71□□□□□ -1.02
LINC01001-203ENST00000607448 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
LINC01001-203ENST00000607448 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 IQCF6A8MYZ5 107 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 C1orf196B1AJZ1 125 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 HSPB6O14558 160 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 CHST1O43916 411 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 IFNA5P01569 189 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 IGHV2-70P01814 119 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 CA6P23280 308 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 TAS2R30P59541 319 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 ERVK11-1P61568 191 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 ZNF497Q6ZNH5 498 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 GPR146Q96CH1 333 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 RBMXL1Q96E39 390 aaKnown RBP8.7□□□□□ -1.02
LINC01001-203ENST00000607448 GCM1Q9NP62 436 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 IL19Q9UHD0 177 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 RNF150Q9ULK6 438 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 WSB1Q9Y6I7 421 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 DOCK11Q5JSL3 2073 aa8.7□□□□□ -1.02
LINC01001-203ENST00000607448 RBFOX3A6NFN3 312 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 M0R036 132 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 SH2D1BO14796 132 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 TXNL1O43396 289 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 PGA5P0DJD9 388 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 HNF1AP20823 631 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 FHITP49789 147 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 SULT1A1P50225 295 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 ZNF146Q15072 292 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 MSMO1Q15800 293 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 IQCF2Q8IXL9 164 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 ZNF561Q8N587 486 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 ZBTB34Q8NCN2 500 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 RNASE11Q8TAA1 199 aaKnown RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 RAB1CQ92928 201 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 HIST1H2BAQ96A08 127 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 MEGF10Q96KG7 1140 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 ZNF488Q96MN9 340 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 MAGT1Q9H0U3 335 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 MBNL3Q9NUK0 354 aaKnown RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 PPP1R3CQ9UQK1 317 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 TRAV1-1A0A0B4J248 108 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 A0A1B0GWJ7 208 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 FAM90A26D6RGX4 464 aa8.69□□□□□ -1.02
LINC01001-203ENST00000607448 SLC33A1O00400 549 aaPredicted RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 HSPB1P04792 205 aaKnown RBP8.69□□□□□ -1.02
LINC01001-203ENST00000607448 SNRNP70P08621 437 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms