RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PRO3102Q9H379 93 aa3.99□□□□□ -1.77
LINC01109-201ENST00000603837 BOKQ9UMX3 212 aaPredicted RBP3.99□□□□□ -1.77
LINC01109-201ENST00000603837 SIT1Q9Y3P8 196 aa3.99□□□□□ -1.77
LINC01109-201ENST00000603837 RNF114Q9Y508 228 aa3.99□□□□□ -1.77
LINC01109-201ENST00000603837 DOCK4Q8N1I0 1966 aa3.99□□□□□ -1.77
LINC01109-201ENST00000603837 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
LINC01109-201ENST00000603837 HELZP42694 1942 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 A0A1W2PPI3 338 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 LMO7DNF2Z398 122 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 J3QR89 54 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF253O75346 499 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 NUDT3O95989 172 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 CATP04040 527 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 CCL5P13501 91 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 RPL7P18124 248 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DUTP33316 252 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 RPL8P62917 257 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 IL15RAQ13261 267 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF684Q5T5D7 378 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FRG2Q64ET8 278 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OR2G3Q8NGZ4 309 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF418Q8TF45 676 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FAM168AQ92567 244 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FGF13Q92913 245 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 WDYHV1Q96HA8 205 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 GPR82Q96P67 336 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DUX3Q96PT4 197 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FRG2BQ96QU4 278 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SPATA25Q9BR10 227 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 TXNIPQ9H3M7 391 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 KLK13Q9UKR3 277 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ERG28Q9UKR5 140 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 MYO15AQ9UKN7 3530 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DOCK6Q96HP0 2047 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SLC22A20A6NK97 555 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 K7EP34 96 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DEGS1O15121 323 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 MPDU1O75352 247 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DEDDO75618 318 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 VPREB1P12018 145 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 NTF3P20783 257 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 CMPK1P30085 196 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OPRM1P35372 400 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SRP14P37108 136 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 GPM6AP51674 278 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 MEF2BQ02080 365 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 IAH1Q2TAA2 248 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DCAF4L1Q3SXM0 396 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 BHLHA9Q7RTU4 235 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DTX2Q86UW9 622 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 BAGE3Q86Y29 109 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 BAGE2Q86Y30 109 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ATOH7Q8N100 152 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 RFLNBQ8N5W9 214 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 TEX45Q8NA69 505 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OR4C13Q8NGP0 309 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 PLPPR1Q8TBJ4 325 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 RNASE7Q9H1E1 156 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 EHFQ9NZC4 300 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 KLHL13Q9P2N7 655 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 GNG13Q9P2W3 67 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SELENOKQ9Y6D0 94 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 PXMP4Q9Y6I8 212 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 COL4A6Q14031 1691 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 F5P12259 2224 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DOCK8Q8NF50 2099 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 A0A087WX48 190 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FAM231BA6NCW3 169 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 DPRXA6NFQ7 191 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FGF1P05230 155 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 CRISP2P16562 243 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 IL3RAP26951 378 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF93P35789 620 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 LINC00310P59036 64 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 FAM27E3Q08E93 113 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OR8B8Q15620 311 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 TRIP6Q15654 476 aaKnown RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 STUMQ69YW2 141 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 LCN10Q6JVE6 187 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 LCN15Q6UWW0 184 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ADAMTSL5Q6ZMM2 481 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZNF550Q7Z398 422 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OR10P1Q8NGE3 313 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 OR4K13Q8NH42 304 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 APOBEC3DQ96AK3 386 aaPredicted RBP3.98□□□□□ -1.77
LINC01109-201ENST00000603837 ZDHHC11Q9H8X9 412 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SERTAD4Q9NUC0 356 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 Q9Y3F1 56 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 NUMA1Q14980 2115 aa3.98□□□□□ -1.77
LINC01109-201ENST00000603837 SCN5AQ14524 2016 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 KIF26AQ9ULI4 1882 aaPredicted RBP3.97□□□□□ -1.77
LINC01109-201ENST00000603837 OR4C46A6NHA9 309 aa3.97□□□□□ -1.77
LINC01109-201ENST00000603837 SIRPB1O00241 398 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms