RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GAPDHP04406 335 aaKnown RBP14.61□□□□□ -0.07
VRK3-225ENST00000601912 NQO2P16083 231 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 HTR1DP28221 377 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 CEACAM3P40198 252 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 NKX2-1P43699 371 aaPredicted RBP14.61□□□□□ -0.07
VRK3-225ENST00000601912 Q5PR19 223 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 TMEM65Q6PI78 240 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 PRSS57Q6UWY2 283 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 H2BFWTQ7Z2G1 175 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 ZNF546Q86UE3 836 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 DMBX1Q8NFW5 382 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 OR5AN1Q8NGI8 311 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 OR4D5Q8NGN0 318 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 OR1S1Q8NH92 325 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 RPEQ96AT9 228 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 NABP2Q9BQ15 211 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 MBD2Q9UBB5 411 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 LEUTXA8MZ59 168 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 B4DSR2 109 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 H7C2Y5 167 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 ST8SIA3O43173 380 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 MBPP02686 304 aaPredicted RBP14.61□□□□□ -0.07
VRK3-225ENST00000601912 MMP9P14780 707 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 MC5RP33032 325 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 DIAPH2-AS1Q14236 149 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 PRSS54Q6PEW0 395 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 FOXRED2Q8IWF2 684 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 AIFM2Q9BRQ8 373 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 CACNG5Q9UF02 275 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 LSM5Q9Y4Y9 91 aaKnown RBP14.61□□□□□ -0.07
VRK3-225ENST00000601912 HSPB11Q9Y547 144 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 WNK2Q9Y3S1 2297 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 NAV2Q8IVL1 2488 aa14.61□□□□□ -0.07
VRK3-225ENST00000601912 POLQO75417 2590 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 H0YJW9 148 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 ARPC5O15511 151 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 HRASP01112 189 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 MSMBP08118 114 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 HOXB4P17483 251 aaPredicted RBP14.6□□□□□ -0.07
VRK3-225ENST00000601912 RAB13P51153 203 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 KLRD1Q13241 179 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 HCP5Q6MZN7 132 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 C9orf62Q8N4C0 152 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 COA4Q9NYJ1 87 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 DPM3Q9P2X0 92 aa14.6□□□□□ -0.07
VRK3-225ENST00000601912 ODF3BA8MYP8 253 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 LGALS4P56470 323 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 PAX8Q06710 450 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 IZUMO4Q1ZYL8 232 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 PDPNQ86YL7 162 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 DCUN1D4Q92564 292 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 LHX4Q969G2 390 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 TBX15Q96SF7 602 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 RNF126Q9BV68 326 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 WASHC3Q9Y3C0 194 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 POMT1Q9Y6A1 747 aa14.59□□□□□ -0.07
VRK3-225ENST00000601912 RNASEK-C17orf49H0YIS7 233 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 LY6LH3BQJ8 138 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 K7EPK0 472 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 PITX3O75364 302 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 DEDDO75618 318 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 P0C879 139 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 ARHGDIBP52566 201 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 LAMTOR1Q6IAA8 161 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 Q6ZRM9 215 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 PDZD9Q8IXQ8 264 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 FAM71E2Q8N5Q1 922 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 INO80EQ8NBZ0 244 aaPredicted RBP14.58□□□□□ -0.07
VRK3-225ENST00000601912 OSR1Q8TAX0 266 aaPredicted RBP14.58□□□□□ -0.07
VRK3-225ENST00000601912 MFFQ9GZY8 342 aa14.58□□□□□ -0.07
VRK3-225ENST00000601912 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.58□□□□□ -0.07
VRK3-225ENST00000601912 GCN1Q92616 2671 aaKnown RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 FAM90A9PA6NNJ1 464 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 H0YIZ8 118 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 L7N2F9 121 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 WRBO00258 174 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 LYL1P12980 280 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 C4BPBP20851 252 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 NUP62P37198 522 aaPredicted RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 UBE2E1P51965 193 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 ID3Q02535 119 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 LOXL1Q08397 574 aaPredicted RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 LGALSLQ3ZCW2 172 aaPredicted RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 CXorf66Q5JRM2 361 aaPredicted RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 TPTE2P1Q5T6R2 138 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 MINOS1Q5TGZ0 78 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 SSX9Q7RTT3 188 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 MOB3BQ86TA1 216 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 OR4C13Q8NGP0 309 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 FLYWCH2Q96CP2 140 aaKnown RBP14.58□□□□□ -0.08
VRK3-225ENST00000601912 C1orf159Q96HA4 380 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 RHOVQ96L33 236 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 OR5AC2Q9NZP5 309 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 TNFSF18Q9UNG2 199 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 MINOS1-NBL1R4GNA1 71 aa14.58□□□□□ -0.08
VRK3-225ENST00000601912 ASH1LQ9NR48 2969 aaKnown RBP14.57□□□□□ -0.08
VRK3-225ENST00000601912 A0A096LNT2 108 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 TRAV20A0A0B4J274 112 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 IGHV1-3A0A0C4DH29 117 aa14.57□□□□□ -0.08
VRK3-225ENST00000601912 SHOXO15266 292 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms